RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 FAM173AQ9BQD7 235 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 YIPF4Q9BSR8 244 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 TPT1P8Q9HAU6 139 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 VSTM2BA6NLU5 285 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 MTHFD2P13995 350 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 NAGAP17050 411 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 INAQ16352 499 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 ANKRD26P1Q6NSI1 321 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 ZNF544Q6NX49 715 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 ABHD12BQ7Z5M8 362 aaPredicted RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 ANKRD53Q8N9V6 530 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 OIT3Q8WWZ8 545 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 TM4SF19Q96DZ7 209 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 SFXN2Q96NB2 322 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 DLL3Q9NYJ7 618 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 IKZF3Q9UKT9 509 aa8.59□□□□□ -1.03
UPF2-202ENST00000357604 COPG1Q9Y678 874 aaKnown RBP8.59□□□□□ -1.03
UPF2-202ENST00000357604 MUC22E2RYF6 1773 aaPredicted RBP8.59□□□□□ -1.04
UPF2-202ENST00000357604 SNX3O60493 162 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 TBX19O60806 448 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 DXOO77932 396 aaKnown RBP8.58□□□□□ -1.04
UPF2-202ENST00000357604 WDPCPO95876 746 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 TPP2P29144 1249 aaPredicted RBP8.58□□□□□ -1.04
UPF2-202ENST00000357604 EIF1P41567 113 aaKnown RBP8.58□□□□□ -1.04
UPF2-202ENST00000357604 DCAF10Q5QP82 559 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 REEP3Q6NUK4 255 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 FAM199XQ6PEV8 388 aaPredicted RBP8.58□□□□□ -1.04
UPF2-202ENST00000357604 DEF8Q6ZN54 512 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 LRRC56Q8IYG6 542 aaPredicted RBP8.58□□□□□ -1.04
UPF2-202ENST00000357604 LINC00471Q8N535 108 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 ZNF555Q8NEP9 628 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 ZNF347Q96SE7 839 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 MYLK2Q9H1R3 596 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 UBQLN4Q9NRR5 601 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 LRFN1Q9P244 771 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 SEMA5BQ9P283 1151 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 PCDHGA6Q9Y5G7 932 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 A0A087WZY1 265 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 CSTAP01040 98 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 IFNW1P05000 195 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 BCHEP06276 602 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 FESP07332 822 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 ETV4P43268 484 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 GYS2P54840 703 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 RUNX2Q13950 521 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 PLAG1Q6DJT9 500 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 SPACA3Q8IXA5 215 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 DEFB107AQ8IZN7 70 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 OR52N2Q8NGI0 321 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 ZNF675Q8TD23 568 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 SMPDL3BQ92485 455 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 THTPAQ9BU02 230 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 FAM60AQ9NP50 221 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 PAQR5Q9NXK6 330 aaPredicted RBP8.58□□□□□ -1.04
UPF2-202ENST00000357604 PCYT1BQ9Y5K3 369 aaPredicted RBP8.58□□□□□ -1.04
UPF2-202ENST00000357604 THADAQ6YHU6 1953 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 HCRTR1O43613 425 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 HCRTR2O43614 444 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 GSNP06396 782 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 FURINP09958 794 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 FCGR2AP12318 317 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 HLCSP50747 726 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 SEC24CP53992 1094 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 DIO3P55073 304 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 SPANXN4Q5MJ08 99 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 STK32CQ86UX6 486 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 PM20D2Q8IYS1 436 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 PPM1MQ96MI6 270 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 CLMPQ9H6B4 373 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 SIRT5Q9NXA8 310 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 EMC3Q9P0I2 261 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 UBL4AP11441 157 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 ZNF24P17028 368 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 DRD4P21917 467 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 ETV5P41161 510 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 SMSP52788 366 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 CDK6Q00534 326 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 RAPSNQ13702 412 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 MLC1Q15049 377 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 C18orf63Q68DL7 685 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 CDC73Q6P1J9 531 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 C19orf48Q6RUI8 117 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 C5orf46Q6UWT4 87 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 TMEM64Q6YI46 380 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 KRTCAP2Q8N6L1 136 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 OR7A2PQ8NGA2 310 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 OR5T3Q8NGG3 340 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 OR10Q1Q8NGQ4 319 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 PNPT1Q8TCS8 783 aaKnown RBP8.58□□□□□ -1.04
UPF2-202ENST00000357604 RCN3Q96D15 328 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 C10orf90Q96M02 699 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 KLHL1Q9NR64 748 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 TEX10Q9NXF1 929 aaPredicted RBP8.58□□□□□ -1.04
UPF2-202ENST00000357604 SNX13Q9Y5W8 968 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 DOCK4Q8N1I0 1966 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 ATG2AQ2TAZ0 1938 aa8.58□□□□□ -1.04
UPF2-202ENST00000357604 IGHV1-45A0A0A0MS14 117 aa8.57□□□□□ -1.04
UPF2-202ENST00000357604 AHSA1O95433 338 aa8.57□□□□□ -1.04
UPF2-202ENST00000357604 DLGAP3O95886 979 aa8.57□□□□□ -1.04
UPF2-202ENST00000357604 LINGO3P0C6S8 592 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms