RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ETS2P15036 469 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 ITGA2P17301 1181 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 SOX18P35713 384 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 BTG2P78543 158 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 HPCAP84074 193 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 PRAMEF17Q5VTA0 474 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 OR2T5Q6IEZ7 315 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 RHBDD2Q6NTF9 364 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 SMYD1Q8NB12 490 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 OR2T29Q8NH02 315 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 SLC9A6Q92581 669 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 RIT1Q92963 219 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 C7orf34Q96L11 122 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 ZNF578Q96N58 590 aaPredicted RBP17.45■□□□□ 0.38
PTN-201ENST00000348225 COL21A1Q96P44 957 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 TRNT1Q96Q11 434 aaKnown RBP17.45■□□□□ 0.38
PTN-201ENST00000348225 SEC14L3Q9UDX4 400 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 ABCG2Q9UNQ0 655 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 PCDHGB3Q9Y5G1 929 aa17.45■□□□□ 0.38
PTN-201ENST00000348225 GPC6Q9Y625 555 aaPredicted RBP17.45■□□□□ 0.38
PTN-201ENST00000348225 G3V2T6 193 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 SOX30O94993 753 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 CHRM4P08173 479 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 ALOX5P09917 674 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 CT62P0C5K7 136 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 MAOAP21397 527 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 GALNSP34059 522 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 FUT5Q11128 374 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 BPHLQ86WA6 291 aaPredicted RBP17.44■□□□□ 0.38
PTN-201ENST00000348225 OR5K1Q8NHB7 308 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.44■□□□□ 0.38
PTN-201ENST00000348225 ZNF347Q96SE7 839 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 PIGUQ9H490 435 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 RUBCNLQ9H714 662 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 THSD1Q9NS62 852 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 LANCL2Q9NS86 450 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 SIDT1Q9NXL6 827 aaKnown RBP17.44■□□□□ 0.38
PTN-201ENST00000348225 AK5Q9Y6K8 562 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 VPS13AQ96RL7 3174 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 NUP210LQ5VU65 1888 aa17.44■□□□□ 0.38
PTN-201ENST00000348225 PRR33A8MZF0 331 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 TGFBR3LH3BV60 316 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 EI24O14681 340 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 DPM1O60762 260 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 HBQ1P09105 142 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 CSTF2P33240 577 aaKnown RBP eCLIP17.43■□□□□ 0.38
PTN-201ENST00000348225 ARHGDIAP52565 204 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 C1orf189Q5VU69 101 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 HEPHL1Q6MZM0 1159 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 QSOX2Q6ZRP7 698 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 HIPK1Q86Z02 1210 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 SLC16A11Q8NCK7 471 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 PROX1Q92786 737 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 SLC35A4Q96G79 324 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 STACQ99469 402 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 OSBPL11Q9BXB4 747 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 TRIM45Q9H8W5 580 aaPredicted RBP17.43■□□□□ 0.38
PTN-201ENST00000348225 MKKSQ9NPJ1 570 aaPredicted RBP17.43■□□□□ 0.38
PTN-201ENST00000348225 C11orf16Q9NQ32 467 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 SYNDIG1LA6NDD5 238 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 JRKO75564 520 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 SCRG1O75711 98 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 H6PDO95479 791 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 CBX7O95931 251 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 IFNA16P05015 189 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 ZNF806P0C7X5 589 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 ACP2P11117 423 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 CD247P20963 164 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 KCNC4Q03721 635 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 ZNF155Q12901 538 aaPredicted RBP17.43■□□□□ 0.38
PTN-201ENST00000348225 MED21Q13503 144 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 EXOSC7Q15024 291 aaKnown RBP17.43■□□□□ 0.38
PTN-201ENST00000348225 MFSD4BQ5TF39 518 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 DGAT2L6Q6ZPD8 337 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 STK32CQ86UX6 486 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 PPP1R3BQ86XI6 285 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 SIMC1Q8NDZ2 872 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 OR52R1Q8NGF1 315 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 DOK4Q8TEW6 326 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 CDS1Q92903 461 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 PTCHD1Q96NR3 888 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 REEP1Q9H902 201 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 NECTIN3Q9NQS3 549 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 DUSP22Q9NRW4 184 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 IFT80Q9P2H3 777 aaPredicted RBP17.43■□□□□ 0.38
PTN-201ENST00000348225 CLDN16Q9Y5I7 305 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 KCNE3Q9Y6H6 103 aa17.43■□□□□ 0.38
PTN-201ENST00000348225 A0A0C4DFX4 3053 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 RALGAPA1Q6GYQ0 2036 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 DMDP11532 3685 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 AK1P00568 194 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 HPRP00739 348 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 IFNW1P05000 195 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 FESP07332 822 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 RPSAP08865 295 aaKnown RBP17.42■□□□□ 0.38
PTN-201ENST00000348225 ATXN8OSP0DMR3 200 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 DCTP40126 519 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 KCNJ5P48544 419 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 DAG1Q14118 895 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 DUSP5Q16690 384 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms