RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 NXF5Q9H1B4 397 aaKnown RBP18.39■□□□□ 0.53
CEACAM3-201ENST00000344550 MYNNQ9NPC7 610 aa18.39■□□□□ 0.53
CEACAM3-201ENST00000344550 LGALS13Q9UHV8 139 aa18.39■□□□□ 0.53
CEACAM3-201ENST00000344550 HRH3Q9Y5N1 445 aa18.39■□□□□ 0.53
CEACAM3-201ENST00000344550 EML6Q6ZMW3 1958 aa18.39■□□□□ 0.53
CEACAM3-201ENST00000344550 FRG2CA6NGY1 282 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 SLC28A1O00337 649 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 TRIM13O60858 407 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 COX6B1P14854 86 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 GRNP28799 593 aaKnown RBP18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 SOX18P35713 384 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 CASP3P42574 277 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 EMDP50402 254 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 FBXW4P57775 412 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 SF3B4Q15427 424 aaKnown RBP eCLIP18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 ERCC6LQ2NKX8 1250 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 SLC30A6Q6NXT4 461 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 CCDC116Q8IYX3 515 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 ACBD4Q8NC06 268 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 NEIL3Q8TAT5 605 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 SDCCAG3Q96C92 435 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 ZNF764Q96H86 408 aaPredicted RBP18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 APOPT1Q96IL0 206 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 BTBD9Q96Q07 612 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 ACAD8Q9UKU7 415 aa18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 GPR55Q9Y2T6 319 aaPredicted RBP18.38■□□□□ 0.53
CEACAM3-201ENST00000344550 CREBBPQ92793 2442 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 A0A087WV62 115 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 OR6C70A6NIJ9 312 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 SMIM23A6NLE4 172 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 NEFHP12036 1026 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 FOXA1P55317 472 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 TRMT12Q53H54 448 aaKnown RBP18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 B3GNT6Q6ZMB0 384 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 C3P1Q6ZMU1 363 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 TRABD2AQ86V40 505 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 FAM9CQ8IZT9 166 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 MARVELD2Q8N4S9 558 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 BANPQ8N9N5 519 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 ADCY4Q8NFM4 1077 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 OR52R1Q8NGF1 315 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 OR5M3Q8NGP4 307 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 CAVIN3Q969G5 261 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 RILPQ96NA2 401 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 UBQLN3Q9H347 655 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 EXO5Q9H790 373 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 MIEF1Q9NQG6 463 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 PFDN4Q9NQP4 134 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 PNPLA3Q9NST1 481 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 TAS2R9Q9NYW1 312 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 CCL27Q9Y4X3 112 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 CACNA1CQ13936 2221 aa18.37■□□□□ 0.53
CEACAM3-201ENST00000344550 MYO1GB0I1T2 1018 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 ZNHIT1O43257 154 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 RGS14O43566 566 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 CHEK2O96017 543 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 HPNP05981 417 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 FGF4P08620 206 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 RFPL3SP0C7P2 107 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 PCSK2P16519 638 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 VSNL1P62760 191 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 MRPS22P82650 360 aaKnown RBP18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 IFFO1Q0D2I5 559 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 DUSP8Q13202 625 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 EXOSC7Q15024 291 aaKnown RBP18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 TIGD3Q6B0B8 471 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 FAM71E1Q6IPT2 247 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 GDF7Q7Z4P5 450 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 MCEMP1Q8IX19 187 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 C4orf33Q8N1A6 199 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 LIX1Q8N485 282 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 AENQ8WTP8 325 aaKnown RBP18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 EXOSC8Q96B26 276 aaKnown RBP18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 BBS4Q96RK4 519 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 TREX2Q9BQ50 279 aaPredicted RBP18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 TMEM109Q9BVC6 243 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 ITPAQ9BY32 194 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 ENKD1Q9H0I2 346 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 PKDREJQ9NTG1 2253 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 DTX4Q9Y2E6 619 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 LIPGQ9Y5X9 500 aa18.36■□□□□ 0.53
CEACAM3-201ENST00000344550 PHF3Q92576 2039 aaKnown RBP18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 TLDC2A0PJX2 215 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 FOXO6A8MYZ6 492 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 AHRRA9YTQ3 701 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 PLOD2O00469 737 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 AZIN1O14977 448 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 NPHS1O60500 1241 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 COQ9O75208 318 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 CELA3AP09093 270 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 GDF1P27539 372 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 SERPINB5P36952 375 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 MASP1P48740 699 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 CDK9P50750 372 aaKnown RBP18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 DUSP2Q05923 314 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 BTKQ06187 659 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 C2orf80Q0P641 193 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 PLCXD2Q0VAA5 305 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 PMPCAQ10713 525 aa18.35■□□□□ 0.53
CEACAM3-201ENST00000344550 EFR3AQ14156 821 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms