RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 MBD1Q9UIS9 605 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TDRD6O60522 2096 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NEXMIFQ5QGS0 1516 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 UGGT1Q9NYU2 1555 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 MEGF11A6BM72 1044 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 FOXN2P32314 431 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 GALNT2Q10471 571 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 LCP2Q13094 533 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 LASP1Q14847 261 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 RAET1GQ6H3X3 334 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 MIEF1Q9NQG6 463 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ASTN1O14525 1302 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 H7C417 338 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TSPAN6O43657 245 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 RPA3P35244 121 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 PRICKLE2Q7Z3G6 844 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 KIAA0319LQ8IZA0 1049 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SPICQ8N5J4 248 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 GEMIN6Q8WXD5 167 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ARNTL2Q8WYA1 636 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ASCL3Q9NQ33 180 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 A0A1B0GTI1 187 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 EI24O14681 340 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CD99P14209 185 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 BPIP17213 487 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CDC25AP30304 524 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SDHAP31040 664 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ABRAXAS2Q15018 415 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 OVOS1Q6IE37 1185 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 LRRC28Q86X40 367 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 UBR7Q8N806 425 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ADAMTS19Q8TE59 1207 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TSEN15Q8WW01 171 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NIPSNAP3BQ9BS92 247 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 EXOSC1Q9Y3B2 195 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 BPNT1O95861 308 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 MT-ATP6P00846 226 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CD80P33681 288 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 HMGCS1Q01581 520 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 GCNT1Q02742 428 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 FAM98CQ17RN3 349 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SV2CQ496J9 727 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 C1orf216Q8TAB5 229 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TRAPPC12Q8WVT3 735 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 GPR137Q96N19 417 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SEC11CQ9BY50 192 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 OR51J1Q9H342 316 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ASB8Q9H765 288 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NPFFR2Q9Y5X5 522 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ADGRB2O60241 1585 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CDRT1O95170 752 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 FABP3P05413 133 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 HIST3H3Q16695 136 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 GOLGA7BQ2TAP0 167 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 PHYHD1Q5SRE7 291 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 FAM151BQ6UXP7 276 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CYP2R1Q6VVX0 501 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 RYBPQ8N488 228 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CHDHQ8NE62 594 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 MTFMTQ96DP5 389 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TAAR9Q96RI9 348 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 FLRT1Q9NZU1 646 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 DNPEPQ9ULA0 475 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ERCC1P07992 297 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 PARP15Q460N3 678 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 PANX1Q96RD7 426 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 PCDHB18PQ96TA0 734 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 FNDC11Q9BVV2 318 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 C13orf42A0A1B0GVH6 325 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 MMP20O60882 483 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 OR2F2O95006 317 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TFP02787 698 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 JAK3P52333 1124 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 FBXW4P57775 412 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 OR2F1Q13607 317 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 LEMD1Q68G75 181 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 INTS5Q6P9B9 1019 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF551Q7Z340 670 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 DUSP19Q8WTR2 217 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 INTS14Q96SY0 518 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SPON1Q9HCB6 807 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TEX13DA0A0J9YY54 714 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 INMTO95050 263 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 BDKRB2P30411 391 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CCR1P32246 355 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ECI1P42126 302 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ACAA2P42765 397 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 DNAJB13P59910 316 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 PRR5P85299 388 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NAAAQ02083 359 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 GCNT2Q8N0V5 402 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 C8orf58Q8NAV2 365 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 LRRC46Q96FV0 321 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CCDC120Q96HB5 630 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 KLHL15Q96M94 604 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 MICU1Q9BPX6 476 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 KXD1Q9BQD3 176 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NKX6-2Q9C056 277 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NARFLQ9H6Q4 476 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms