RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 CASP6P55212 293 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 SMAD4Q13485 552 aaKnown RBP12.06□□□□□ -0.48
BRPF3-201ENST00000339717 CPSF6Q16630 551 aaKnown RBP eCLIP12.06□□□□□ -0.48
BRPF3-201ENST00000339717 ADGRF1Q5T601 910 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 NPAS3Q8IXF0 933 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 C4orf19Q8IY42 314 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 C9orf62Q8N4C0 152 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 B3GNT7Q8NFL0 401 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 OR56B1Q8NGI3 324 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 TSEN15Q8WW01 171 aaKnown RBP12.06□□□□□ -0.48
BRPF3-201ENST00000339717 PPCDCQ96CD2 204 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 FOXRED1Q96CU9 486 aaPredicted RBP12.06□□□□□ -0.48
BRPF3-201ENST00000339717 AARSD1Q9BTE6 412 aaKnown RBP12.06□□□□□ -0.48
BRPF3-201ENST00000339717 FGFBP2Q9BYJ0 223 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 ACTL8Q9H568 366 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 DUSP21Q9H596 190 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 EVA1AQ9H8M9 152 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 HYKKA2RU49 373 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 TCF21O43680 179 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 CRYBA1P05813 215 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 CST2P09228 141 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 OR8U9P0C7N5 309 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 PKMP14618 531 aaKnown RBP12.06□□□□□ -0.48
BRPF3-201ENST00000339717 YBX3P16989 372 aaKnown RBP eCLIP12.06□□□□□ -0.486e-7■■■□□ 18.5
BRPF3-201ENST00000339717 OR3A2P47893 321 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 CLINT1Q14677 625 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 APOBEC3HQ6NTF7 200 aaKnown RBP12.06□□□□□ -0.48
BRPF3-201ENST00000339717 ZNF627Q7L945 461 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 MOB1BQ7L9L4 216 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 TMPRSS11BQ86T26 416 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 RNF149Q8NC42 400 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 FAM98AQ8NCA5 519 aaKnown RBP12.06□□□□□ -0.48
BRPF3-201ENST00000339717 BPIFCQ8NFQ6 507 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 SHKBP1Q8TBC3 707 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 RAB24Q969Q5 203 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 APOLD1Q96LR9 279 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 HMX1Q9NP08 348 aaPredicted RBP12.06□□□□□ -0.48
BRPF3-201ENST00000339717 SOHLH2Q9NX45 425 aa12.06□□□□□ -0.48
BRPF3-201ENST00000339717 A0A1W2PS29 197 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 HRO43593 1189 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 ENGP17813 658 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 EFNA1P20827 205 aaPredicted RBP12.05□□□□□ -0.48
BRPF3-201ENST00000339717 BDKRB2P30411 391 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 KIR2DL3P43628 341 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 CHRNA4P43681 627 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 MGAT3Q09327 533 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 GPR176Q14439 515 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 TTLL4Q14679 1199 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 MAPK14Q16539 360 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 DNM1P34Q6PK57 102 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 B3GLCTQ6Y288 498 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 GALNT10Q86SR1 603 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 APOBEC3FQ8IUX4 373 aaKnown RBP12.05□□□□□ -0.48
BRPF3-201ENST00000339717 DTWD1Q8N5C7 304 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 OR14A16Q8NHC5 309 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 BRIX1Q8TDN6 353 aaKnown RBP12.05□□□□□ -0.48
BRPF3-201ENST00000339717 SMARCD2Q92925 531 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 KXD1Q9BQD3 176 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 IPPKQ9H8X2 491 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 PDE7BQ9NP56 450 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 SPATA6Q9NWH7 488 aaPredicted RBP12.05□□□□□ -0.48
BRPF3-201ENST00000339717 SLC17A6Q9P2U8 582 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 ATF5Q9Y2D1 282 aaPredicted RBP12.05□□□□□ -0.48
BRPF3-201ENST00000339717 PUS1Q9Y606 427 aaKnown RBP eCLIP12.05□□□□□ -0.48
BRPF3-201ENST00000339717 ABHD14A-ACY1A0A1B0GW23 586 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 RFPL4AA6NLU0 287 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 RFPL4AL1F8VTS6 287 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 RPLP2P05387 115 aaKnown RBP12.05□□□□□ -0.48
BRPF3-201ENST00000339717 ZNF888P0CJ79 500 aaPredicted RBP12.05□□□□□ -0.48
BRPF3-201ENST00000339717 IFNGR1P15260 489 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 GABRB1P18505 474 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 ISL1P61371 349 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 PDZD3Q86UT5 571 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 MRPL15Q9P015 296 aaKnown RBP12.05□□□□□ -0.48
BRPF3-201ENST00000339717 CPS1P31327 1500 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 LRRIQ1Q96JM4 1722 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 CD8B2A6NJW9 211 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 CD3GP09693 182 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 CD8BP10966 210 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 SRP9P49458 86 aaKnown RBP12.05□□□□□ -0.48
BRPF3-201ENST00000339717 CELF3Q5SZQ8 465 aaKnown RBP12.05□□□□□ -0.48
BRPF3-201ENST00000339717 THEM4Q5T1C6 240 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 TTLL10Q6ZVT0 673 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 TRILQ7L0X0 811 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 CCDC54Q8NEL0 328 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 OR7D4Q8NG98 312 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 TOE1Q96GM8 510 aaKnown RBP12.05□□□□□ -0.48
BRPF3-201ENST00000339717 KCNH6Q9H252 994 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 NEURL4Q96JN8 1562 aa12.05□□□□□ -0.48
BRPF3-201ENST00000339717 C2orf92A0A1B0GVN3 265 aa12.04□□□□□ -0.48
BRPF3-201ENST00000339717 IGFBP1P08833 259 aaPredicted RBP12.04□□□□□ -0.48
BRPF3-201ENST00000339717 PRPS1L1P21108 318 aa12.04□□□□□ -0.48
BRPF3-201ENST00000339717 PTH2RP49190 550 aa12.04□□□□□ -0.48
BRPF3-201ENST00000339717 SCARB2Q14108 478 aa12.04□□□□□ -0.48
BRPF3-201ENST00000339717 GANABQ14697 944 aaKnown RBP12.04□□□□□ -0.48
BRPF3-201ENST00000339717 DUOXA1Q1HG43 343 aa12.04□□□□□ -0.48
BRPF3-201ENST00000339717 AAK1Q2M2I8 961 aa12.04□□□□□ -0.48
BRPF3-201ENST00000339717 GLT8D1Q68CQ7 371 aa12.04□□□□□ -0.48
BRPF3-201ENST00000339717 OR52W1Q6IF63 320 aa12.04□□□□□ -0.48
BRPF3-201ENST00000339717 IL34Q6ZMJ4 242 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms