RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TMEM19Q96HH6 336 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 NTMT1Q9BV86 223 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 LMAN2LQ9H0V9 348 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 IMP3Q9NV31 184 aaKnown RBP12.59□□□□□ -0.39
COL2A1-201ENST00000337299 GLS2Q9UI32 602 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 RCE1Q9Y256 329 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.59□□□□□ -0.39
COL2A1-201ENST00000337299 A0A1B0GVT2 93 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 hCG_1807616A0A1W2PRN6 198 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 PRMT3O60678 531 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 KCNK5O95279 499 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 GTF2F2P13984 249 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 TGM3Q08188 693 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 NFATC2Q13469 925 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 RD3Q7Z3Z2 195 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 SH3RF2Q8TEC5 729 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 BIN3Q9NQY0 253 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 SCP2D1Q9UJQ7 156 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 OR7A17O14581 309 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 PRICKLE3O43900 615 aaPredicted RBP12.59□□□□□ -0.39
COL2A1-201ENST00000337299 ATG13O75143 517 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 IL3P08700 152 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 JUPP14923 745 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 ADRA1AP35348 466 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 GJA5P36382 358 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 MAPK8P45983 427 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 PTH2RP49190 550 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 VEZF1Q14119 521 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 YIF1BQ5BJH7 314 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 POMZP3Q6PJE2 187 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 OR51L1Q8NGJ5 315 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 OR51A7Q8NH64 312 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 DPF3Q92784 378 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 FBXW5Q969U6 566 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 GAL3ST3Q96A11 431 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 RHBDF1Q96CC6 855 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 HSPA12BQ96MM6 686 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 MTIF3Q9H2K0 278 aaKnown RBP12.59□□□□□ -0.39
COL2A1-201ENST00000337299 ACOXLQ9NUZ1 547 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 ZDHHC3Q9NYG2 299 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 FBXL2Q9UKC9 423 aa12.59□□□□□ -0.39
COL2A1-201ENST00000337299 RP1L1Q8IWN7 2480 aaPredicted RBP12.58□□□□□ -0.39
COL2A1-201ENST00000337299 CDK2AP1O14519 115 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 GMFGO60234 142 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 FKTNO75072 461 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 PRAMEF12O95522 483 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 TCRBP04435 133 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 HLA-DMAP28067 261 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 CD6P30203 668 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 AIMP2Q13155 320 aaKnown RBP12.58□□□□□ -0.4
COL2A1-201ENST00000337299 GPR176Q14439 515 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 GRB14Q14449 540 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 NDUFA9Q16795 377 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 MPPE1Q53F39 396 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 SLC25A24Q6NUK1 477 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 NLGN4YQ8NFZ3 816 aaPredicted RBP12.58□□□□□ -0.4
COL2A1-201ENST00000337299 OR6M1Q8NGM8 313 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 GRHL3Q8TE85 626 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 CNOT9Q92600 299 aaKnown RBP12.58□□□□□ -0.4
COL2A1-201ENST00000337299 NT5C3BQ969T7 300 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 FAM46AQ96IP4 442 aaKnown RBP12.58□□□□□ -0.4
COL2A1-201ENST00000337299 OR2M2Q96R28 347 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 TRBV4-1A0A0J9YWV2 114 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 RGS9O75916 674 aaPredicted RBP12.58□□□□□ -0.4
COL2A1-201ENST00000337299 ALPPP05187 535 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 EPHA5P54756 1037 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 TMEM44Q2T9K0 475 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 TMEM88Q6PEY1 159 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 YAF2Q8IY57 180 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 ZNF676Q8N7Q3 588 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 CD300LFQ8TDQ1 290 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 ZDHHC1Q8WTX9 485 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 KXD1Q9BQD3 176 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 AIF1LQ9BQI0 150 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 WRAP53Q9BUR4 548 aaKnown RBP12.58□□□□□ -0.4
COL2A1-201ENST00000337299 SYNPO2LQ9H987 977 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 UPB1Q9UBR1 384 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 ZNF780BQ9Y6R6 833 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 IGKV6-21A0A0C4DH24 114 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 A0A1B0GV50 99 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 ELOA3DA6NLF2 546 aaPredicted RBP12.58□□□□□ -0.4
COL2A1-201ENST00000337299 C1orf196B1AJZ1 125 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 PCDH8O95206 1070 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 CCND3P30281 292 aaPredicted RBP12.58□□□□□ -0.4
COL2A1-201ENST00000337299 GRK5P34947 590 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 ELOA3BQ3SY89 546 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 MDGA1Q8NFP4 955 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 ELOA3Q8NG57 546 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 TMEM121BQ9BXQ6 578 aaPredicted RBP12.58□□□□□ -0.4
COL2A1-201ENST00000337299 B3GNT4Q9C0J1 378 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 NIT2Q9NQR4 276 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 SPG21Q9NZD8 308 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 ADAMTS5Q9UNA0 930 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 SPAG17Q6Q759 2223 aa12.58□□□□□ -0.4
COL2A1-201ENST00000337299 HYKKA2RU49 373 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 MEIS3P1A6NDR6 274 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 OR6C75A6NL08 312 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 TTLL8A6PVC2 850 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 SCAMP1O15126 338 aa12.57□□□□□ -0.4
COL2A1-201ENST00000337299 SCAMP2O15127 329 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms