RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 A0A087WV62 115 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 A8MU76 341 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 PLOD3O60568 738 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 CBX7O95931 251 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 RNH1P13489 461 aaKnown RBP11.33□□□□□ -0.6
SDE2-201ENST00000272091 EFNA3P52797 238 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 CRISP3P54108 245 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 CHRNEQ04844 493 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 KCNAB2Q13303 367 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.33□□□□□ -0.6
SDE2-201ENST00000272091 SDCCAG3Q96C92 435 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 ZNF354BQ96LW1 612 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 RDH12Q96NR8 316 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 REEP1Q9H902 201 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 EXD2Q9NVH0 621 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 FBXO4Q9UKT5 387 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 CLCA2Q9UQC9 943 aa11.33□□□□□ -0.6
SDE2-201ENST00000272091 A0A1W2PQM1 296 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 HRKO00198 91 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 JRKO75564 520 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 CFIP05156 583 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 LINGO3P0C6S8 592 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 APOFQ13790 326 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 OR6C4Q8NGE1 309 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 MMABQ96EY8 250 aaPredicted RBP11.32□□□□□ -0.6
SDE2-201ENST00000272091 MUS81Q96NY9 551 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 H3BNH8 94 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 FCMRO60667 390 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 PDE9AO76083 593 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 SLC35E2P0CK97 266 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 NT5EP21589 574 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 PPP2R1BP30154 601 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 EMP3P54852 163 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 GANABQ14697 944 aaKnown RBP11.32□□□□□ -0.6
SDE2-201ENST00000272091 NR0B2Q15466 257 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 FOXB2Q5VYV0 432 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 FRRS1Q6ZNA5 592 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 GALNT5Q7Z7M9 940 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 PIP5K1AQ99755 562 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 BTBD2Q9BX70 525 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 ZNF768Q9H5H4 540 aaKnown RBP11.32□□□□□ -0.6
SDE2-201ENST00000272091 PNPLA3Q9NST1 481 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 RLIMQ9NVW2 624 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 RHCGQ9UBD6 479 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 MAU2Q9Y6X3 613 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 KMT2EQ8IZD2 1858 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 CABIN1Q9Y6J0 2220 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 ALBP02768 609 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 ETS2P15036 469 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 PNLIPP16233 465 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 SPIBQ01892 262 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 NPTX1Q15818 432 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 EXOC3L2Q2M3D2 409 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 GPAT3Q53EU6 434 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 PRAMEF8Q5VWM4 474 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 PRAMEF7Q5VXH5 474 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 TCTN3Q6NUS6 607 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 FAM181AQ8N9Y4 354 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 HOXB13Q92826 284 aaPredicted RBP11.32□□□□□ -0.6
SDE2-201ENST00000272091 TRNT1Q96Q11 434 aaKnown RBP11.32□□□□□ -0.6
SDE2-201ENST00000272091 ZNF347Q96SE7 839 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 ZNF607Q96SK3 696 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 DUSP23Q9BVJ7 150 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 LANCL2Q9NS86 450 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 CUTCQ9NTM9 273 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 SEC14L3Q9UDX4 400 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 BAG5Q9UL15 447 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 PCDHGB3Q9Y5G1 929 aa11.32□□□□□ -0.6
SDE2-201ENST00000272091 COL27A1Q8IZC6 1860 aaPredicted RBP11.32□□□□□ -0.6
SDE2-201ENST00000272091 A0A0G2JPF8 293 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 CENPVL1A0A0U1RR11 272 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 HNRNPCL2B2RXH8 293 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 HNRNPCL3B7ZW38 293 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 IFI6P09912 130 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 HNRNPCL4P0DMR1 293 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 MAOAP21397 527 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 CDH12P55289 794 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 GRM7Q14831 915 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 OR51Q1Q8NH59 317 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 OR52J3Q8NH60 311 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 ZNF501Q96CX3 271 aaPredicted RBP11.31□□□□□ -0.6
SDE2-201ENST00000272091 DNAAF2Q9NVR5 837 aaKnown RBP11.31□□□□□ -0.6
SDE2-201ENST00000272091 TRIM64A6NGJ6 449 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 A8MVJ9 347 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 H0YIG0 161 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 M0R3H8 397 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 TNFRSF11BO00300 401 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 PCDH17O14917 1159 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 ZNF749O43361 778 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 CTNSO60931 367 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 OR2B3O76000 313 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 TNFAIP8O95379 198 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 IFNW1P05000 195 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 IGFBP5P24593 272 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 EPHA2P29317 976 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 HMGA2P52926 109 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 CCL7P80098 99 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 KCNC4Q03721 635 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 SQSTM1Q13501 440 aa11.31□□□□□ -0.6
SDE2-201ENST00000272091 FAM214AQ32MH5 1076 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms