RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 CCDC74AQ96AQ1 378 aa14.38□□□□□ -0.11
COPS3-201ENST00000268717 DPYSL5Q9BPU6 564 aa14.38□□□□□ -0.11
COPS3-201ENST00000268717 TREX2Q9BQ50 279 aaPredicted RBP14.38□□□□□ -0.11
COPS3-201ENST00000268717 GPC6Q9Y625 555 aaPredicted RBP14.38□□□□□ -0.11
COPS3-201ENST00000268717 AK5Q9Y6K8 562 aa14.38□□□□□ -0.11
COPS3-201ENST00000268717 ASXL3Q9C0F0 2248 aa14.38□□□□□ -0.11
COPS3-201ENST00000268717 A0A0A6YYC8 382 aaPredicted RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 A0A0G2JPF8 293 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 HNRNPCL2B2RXH8 293 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 HNRNPCL3B7ZW38 293 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 I3L1I5 382 aaPredicted RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 SIGLEC6O43699 453 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 SLC28A2O43868 658 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 ANKRD34CP0C6C1 535 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 HNRNPCL4P0DMR1 293 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 NR2F1P10589 423 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 MYF5P13349 255 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 CD247P20963 164 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 CSF2RBP32927 897 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 GCGRP47871 477 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 ARL4DP49703 201 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 PRKAG1P54619 331 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 IGLV3-21P80748 117 aaPredicted RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 COL9A2Q14055 689 aaPredicted RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 LTB4RQ15722 352 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 CLPPQ16740 277 aaPredicted RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 PROX2Q3B8N5 592 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 EXOSC6Q5RKV6 272 aaKnown RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 FHL5Q5TD97 284 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 MFSD12Q6NUT3 480 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 TMEM52Q8NDY8 209 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 C7orf57Q8NEG2 295 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 OR7G2Q8NG99 324 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 SPPL2AQ8TCT8 520 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 APOBEC4Q8WW27 367 aaKnown RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 XAGE5Q8WWM1 108 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 RAB8BQ92930 207 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 NAT6Q93015 286 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 ANKRD9Q96BM1 317 aaPredicted RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 TRNT1Q96Q11 434 aaKnown RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 ZNF300Q96RE9 604 aaPredicted RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 ZNF768Q9H5H4 540 aaKnown RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 REEP1Q9H902 201 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 GIN1Q9NXP7 522 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 NDUFAF4Q9P032 175 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 TRPC4Q9UBN4 977 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 SCOCQ9UIL1 159 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 PCDHGB3Q9Y5G1 929 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 PCDHGA1Q9Y5H4 931 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 LY6G6EA0A0G2JKS1 128 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 PRAMEF27A3QJZ7 478 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 EME2A4GXA9 379 aaPredicted RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 hCG_2039718K7EN88 272 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 CTNSO60931 367 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 DNAJB5O75953 348 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 OPN1SWP03999 348 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 THRBP10828 461 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 NELFEP18615 380 aaKnown RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 MYF6P23409 242 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 CAPGP40121 348 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 KCNJ5P48544 419 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 OTUD3Q5T2D3 398 aaPredicted RBP14.37□□□□□ -0.11
COPS3-201ENST00000268717 ATAD3BQ5T9A4 648 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 HEPHL1Q6MZM0 1159 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 TMEM71Q6P5X7 295 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 DHRSXQ8N5I4 330 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 OR5D16Q8NGK9 328 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 KAT2AQ92830 837 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 CTHRC1Q96CG8 243 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 OR7D2Q96RA2 312 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 EXD2Q9NVH0 621 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 PDP2Q9P2J9 529 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 KLK13Q9UKR3 277 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 U3KQA8 63 aa14.37□□□□□ -0.11
COPS3-201ENST00000268717 DSPPQ9NZW4 1301 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 RP1P56715 2156 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 EPG5Q9HCE0 2579 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 CLDN4O14493 209 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 ZNF749O43361 778 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 MED26O95402 600 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 GALNSP34059 522 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 SOX18P35713 384 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 IST1P53990 364 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 FUT5Q11128 374 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 SYPL1Q16563 259 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 PRICKLE4Q2TBC4 344 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 AMZ1Q400G9 498 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 FAM111BQ6SJ93 734 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 USP51Q70EK9 711 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 TSEN54Q7Z6J9 526 aaKnown RBP14.36□□□□□ -0.11
COPS3-201ENST00000268717 OR4N5Q8IXE1 308 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 Q8N9G6 341 aaPredicted RBP14.36□□□□□ -0.11
COPS3-201ENST00000268717 COL26A1Q96A83 441 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 MAGED4Q96JG8 741 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 ZNF354BQ96LW1 612 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 CNBD2Q96M20 576 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 CNTNAP3BQ96NU0 1288 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 CNTNAP3Q9BZ76 1288 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 IRAK4Q9NWZ3 460 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 VNN3Q9NY84 501 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms