RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ZNF347Q96SE7 839 aa20.92■□□□□ 0.94
SIX3-201ENST00000260653 QRSL1Q9H0R6 528 aaKnown RBP20.92■□□□□ 0.94
SIX3-201ENST00000260653 CUTCQ9NTM9 273 aa20.92■□□□□ 0.94
SIX3-201ENST00000260653 EXD2Q9NVH0 621 aa20.92■□□□□ 0.94
SIX3-201ENST00000260653 LYVE1Q9Y5Y7 322 aa20.92■□□□□ 0.94
SIX3-201ENST00000260653 XCR1P46094 333 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 EXOSC7Q15024 291 aaKnown RBP20.91■□□□□ 0.94
SIX3-201ENST00000260653 TTLL10Q6ZVT0 673 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 COMTD1Q86VU5 262 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 CYP4Z1Q86W10 505 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 KRT73Q86Y46 540 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 CDS1Q92903 461 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 MBOAT4Q96T53 435 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 EPYCQ99645 322 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 MRPS33Q9Y291 106 aaKnown RBP20.91■□□□□ 0.94
SIX3-201ENST00000260653 PCDHGB3Q9Y5G1 929 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 ADAMDEC1O15204 470 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 PLOD3O60568 738 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 IFNW1P05000 195 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 SLC35E2P0CK97 266 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 ITGA2P17301 1181 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 BTG2P78543 158 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 SPIBQ01892 262 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 KCNC4Q03721 635 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 GNA13Q14344 377 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 FAM214AQ32MH5 1076 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 TRIM61Q5EBN2 209 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 C16orf62Q7Z3J2 963 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 EID2Q8N6I1 236 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 ZNF675Q8TD23 568 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 RDH12Q96NR8 316 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 WFDC6Q9BQY6 131 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 SLC38A1Q9H2H9 487 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 ENPP4Q9Y6X5 453 aa20.91■□□□□ 0.94
SIX3-201ENST00000260653 A0A087WV62 115 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 OR10H2O60403 315 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 MITFO75030 526 aaPredicted RBP20.9■□□□□ 0.94
SIX3-201ENST00000260653 DNAJB5O75953 348 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 FUT4P22083 530 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 PIGAP37287 484 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 DAPP51397 102 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 CDH12P55289 794 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 DUSP5Q16690 384 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 ATAD3BQ5T9A4 648 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 OR51Q1Q8NH59 317 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 OR52J3Q8NH60 311 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 NRBF2Q96F24 287 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 GIN1Q9NXP7 522 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 ADAMTS20P59510 1910 aa20.9■□□□□ 0.94
SIX3-201ENST00000260653 H0YAE9 185 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 JRKO75564 520 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 TNFAIP8O95379 198 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 ACP2P11117 423 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 ETS2P15036 469 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 PNLIPP16233 465 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 HOXD12P35452 270 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 GANABQ14697 944 aaKnown RBP20.89■□□□□ 0.94
SIX3-201ENST00000260653 USP51Q70EK9 711 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 GALNT5Q7Z7M9 940 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 ZNF595Q8IYB9 648 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 RASSF5Q8WWW0 418 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 CTHRC1Q96CG8 243 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 ZNF354BQ96LW1 612 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 PNPLA3Q9NST1 481 aa20.89■□□□□ 0.94
SIX3-201ENST00000260653 DHCR7Q9UBM7 475 aaKnown RBP20.89■□□□□ 0.94
SIX3-201ENST00000260653 A0A0G2JPF8 293 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 HNRNPCL2B2RXH8 293 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 HNRNPCL3B7ZW38 293 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 H0YIG0 161 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 TNFRSF11BO00300 401 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 ZIC2O95409 532 aaPredicted RBP20.89■□□□□ 0.93
SIX3-201ENST00000260653 HNRNPCL4P0DMR1 293 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 ALAS2P22557 587 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 IGFBP5P24593 272 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 CHRNEQ04844 493 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 KCNAB2Q13303 367 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 ZNF574Q6ZN55 896 aaPredicted RBP20.89■□□□□ 0.93
SIX3-201ENST00000260653 OR4D11Q8NGI4 311 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 VANGL1Q8TAA9 524 aaPredicted RBP20.89■□□□□ 0.93
SIX3-201ENST00000260653 ADAMTS18Q8TE60 1221 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 TRNT1Q96Q11 434 aaKnown RBP20.89■□□□□ 0.93
SIX3-201ENST00000260653 PIP5K1AQ99755 562 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 BTBD2Q9BX70 525 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 PRTFDC1Q9NRG1 225 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 NDOR1Q9UHB4 597 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 C3orf18Q9UK00 162 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 LIPT1Q9Y234 373 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 CLDN16Q9Y5I7 305 aa20.89■□□□□ 0.93
SIX3-201ENST00000260653 ASCC3Q8N3C0 2202 aaKnown RBP20.89■□□□□ 0.93
SIX3-201ENST00000260653 A0A1W2PQM1 296 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 DUXAA6NLW8 204 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 YKT6O15498 198 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 CTNSO60931 367 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 MAOAP21397 527 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 PDX1P52945 283 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 EMP3P54852 163 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 STX4Q12846 297 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 MLIPQ5VWP3 458 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 HEPHL1Q6MZM0 1159 aa20.88■□□□□ 0.93
SIX3-201ENST00000260653 RBM45Q8IUH3 476 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms