RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 PTCHD1Q96NR3 888 aa17.51■□□□□ 0.39
TNFSF9-201ENST00000245817 PHOX2BQ99453 314 aa17.51■□□□□ 0.39
TNFSF9-201ENST00000245817 TREX2Q9BQ50 279 aaPredicted RBP17.51■□□□□ 0.39
TNFSF9-201ENST00000245817 Q9H521 79 aa17.51■□□□□ 0.39
TNFSF9-201ENST00000245817 CXorf21Q9HAI6 301 aa17.51■□□□□ 0.39
TNFSF9-201ENST00000245817 SEMA4GQ9NTN9 838 aa17.51■□□□□ 0.39
TNFSF9-201ENST00000245817 SEC14L3Q9UDX4 400 aa17.51■□□□□ 0.39
TNFSF9-201ENST00000245817 EP300Q09472 2414 aaPredicted RBP17.51■□□□□ 0.39
TNFSF9-201ENST00000245817 A0A0G2JPF8 293 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 HNRNPCL2B2RXH8 293 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 HNRNPCL3B7ZW38 293 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 H0YJX3 145 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 hCG_2039718K7EN88 272 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 DYRK3O43781 588 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 SCRG1O75711 98 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 HBQ1P09105 142 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 ALOX5P09917 674 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 HNRNPCL4P0DMR1 293 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 ITGA2P17301 1181 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 ARHGDIAP52565 204 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 CRYBA2P53672 197 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 KCNJ10P78508 379 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 SF3A2Q15428 464 aaKnown RBP17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 PRAMEF8Q5VWM4 474 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 PRAMEF7Q5VXH5 474 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 PPP4R4Q6NUP7 873 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 CBR4Q8N4T8 237 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 CDRT4Q8N9R6 151 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 SMYD1Q8NB12 490 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 AGBL5Q8NDL9 886 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 GEMIN6Q8WXD5 167 aaKnown RBP17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 PROX1Q92786 737 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 TMBIM1Q969X1 311 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 CTHRC1Q96CG8 243 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 ZNF578Q96N58 590 aaPredicted RBP17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 COL21A1Q96P44 957 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 BTBD9Q96Q07 612 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 TRNT1Q96Q11 434 aaKnown RBP17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 RUBCNLQ9H714 662 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 CACYBPQ9HB71 228 aaKnown RBP17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 MKKSQ9NPJ1 570 aaPredicted RBP17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 GIN1Q9NXP7 522 aa17.5■□□□□ 0.39
TNFSF9-201ENST00000245817 JRKO75564 520 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 SOX30O94993 753 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 SEMG1P04279 462 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 CT62P0C5K7 136 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 ZNF26P17031 533 aaPredicted RBP17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 MAN2A2P49641 1150 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 MGAT2Q10469 447 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 ZNHIT3Q15649 155 aaPredicted RBP17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 CSRP2Q16527 193 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 MED25Q71SY5 747 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 SVOPLQ8N434 492 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 SLC16A11Q8NCK7 471 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 OR52R1Q8NGF1 315 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 SLC35A4Q96G79 324 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 BTBD2Q9BX70 525 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 TRIM45Q9H8W5 580 aaPredicted RBP17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 BCL2L10Q9HD36 194 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 PADI2Q9Y2J8 665 aa17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 RIF1Q5UIP0 2472 aaKnown RBP17.49■□□□□ 0.39
TNFSF9-201ENST00000245817 EFCAB7A8K855 629 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 G3V2T6 193 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 PDLIM1O00151 329 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 SOCS2O14508 198 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 PRSS23O95084 383 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 MFN2O95140 757 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 H6PDO95479 791 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 ETS2P15036 469 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 GALNSP34059 522 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 VLDLRP98155 873 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 ZNF267Q14586 743 aaPredicted RBP17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 EXOSC7Q15024 291 aaKnown RBP17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 CMPK2Q5EBM0 449 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 OR2T5Q6IEZ7 315 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 QSOX2Q6ZRP7 698 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 PIWIL3Q7Z3Z3 882 aaKnown RBP17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 WDR53Q7Z5U6 358 aaPredicted RBP17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 OR2T29Q8NH02 315 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 SLC29A1Q99808 456 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 EDEM2Q9BV94 578 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 PIGUQ9H490 435 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 NTN4Q9HB63 628 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 NECTIN3Q9NQS3 549 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 LANCL2Q9NS86 450 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 AKAP7Q9P0M2 348 aaPredicted RBP17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 LRCH1Q9Y2L9 728 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 SH3GLB1Q9Y371 365 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 FAM32AQ9Y421 112 aaKnown RBP17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 KCNE3Q9Y6H6 103 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 ZFHX2Q9C0A1 2572 aaPredicted RBP17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 PRAMEF27A3QJZ7 478 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 OR2W5A6NFC9 320 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 TGFBR3LH3BV60 316 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 RASAL1O95294 804 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 PGDP52209 483 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 ZNF155Q12901 538 aaPredicted RBP17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 IL11RAQ14626 422 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 MAPK11Q15759 364 aa17.48■□□□□ 0.39
TNFSF9-201ENST00000245817 PWWP2BQ6NUJ5 590 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms