RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ZNF565Q8N9K5 539 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 PCYT2Q99447 389 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 PRMT8Q9NR22 394 aaPredicted RBP7.17□□□□□ -1.26
RIF1-201ENST00000243326 KCNN3Q9UGI6 736 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 H0YAE9 185 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 ICMTO60725 284 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 GPX3P22352 226 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CD300CQ08708 224 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 UNQ6126/PRO20091Q6UXV3 157 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CHRDL2Q6WN34 429 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 RPLP0P6Q8NHW5 317 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 ST7LQ8TDW4 575 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 SGIP1Q9BQI5 828 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 MYO7BQ6PIF6 2116 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 KMOO15229 486 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 TFAP2AP05549 437 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 KDELR2P33947 212 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CAMLGP49069 296 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 RPS25P62851 125 aaKnown RBP7.17□□□□□ -1.26
RIF1-201ENST00000243326 GPR19Q15760 415 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 NDUFAF7Q7L592 441 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 GALNT7Q86SF2 657 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 OR4F15Q8NGB8 312 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 TMEM19Q96HH6 336 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 MON2Q7Z3U7 1717 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 KNG1P01042 644 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 PCGF3Q3KNV8 242 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CPOQ8IVL8 374 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 MCEMP1Q8IX19 187 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 FAM86B1Q8N7N1 296 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 LCHNA4D1U4 455 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 HRO43593 1189 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 MAFKO60675 156 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 SGSHP51688 502 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 DEFB110Q30KQ9 67 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 REEP3Q6NUK4 255 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 FAM198BQ6UWH4 519 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 CACNG2Q9Y698 323 aa7.17□□□□□ -1.26
RIF1-201ENST00000243326 PRKRAO75569 313 aaKnown RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 SORDQ00796 357 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 TRAM2Q15035 370 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 IRAK1BP1Q5VVH5 260 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 GPR139Q6DWJ6 353 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 LRFN4Q6PJG9 635 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 C6orf120Q7Z4R8 191 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 SLC29A3Q9BZD2 475 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 C3P01024 1663 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 SOCS6O14544 535 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 GCGRP47871 477 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 STEAP3Q658P3 488 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 DPY19L4Q7Z388 723 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 SDR9C7Q8NEX9 313 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 C1orf196B1AJZ1 125 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 ALDOCP09972 364 aaKnown RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 SYN1P17600 705 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 CHRFAM7AQ494W8 412 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 TCEAL6Q6IPX3 200 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 TAPBPLQ9BX59 468 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 SYT4Q9H2B2 425 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 OR6C75A6NL08 312 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 K7EPK0 472 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 SLC9A3R1O14745 358 aaPredicted RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 PI15O43692 258 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 ATP4BP51164 291 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 SNTB2Q13425 540 aaKnown RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 Q6ZVL8 140 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 FAM71E2Q8N5Q1 922 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 SMAP2Q8WU79 429 aaPredicted RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 HRH4Q9H3N8 390 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 B4GALT6Q9UBX8 382 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 RASD1Q9Y272 281 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 SPIN4Q56A73 249 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 SLC16A9Q7RTY1 509 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 ZNF283Q8N7M2 679 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 CREB3L1Q96BA8 519 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 OR8D2Q9GZM6 311 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 REEP4Q9H6H4 257 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 ZNF142P52746 1687 aaPredicted RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 PAHP00439 452 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 TACSTD2P09758 323 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 BMP8BP34820 402 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 MCCD1P59942 119 aaPredicted RBP7.16□□□□□ -1.26
RIF1-201ENST00000243326 CLINT1Q14677 625 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 ITPRIPL2Q3MIP1 535 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 GXYLT1Q4G148 440 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 OR2G6Q5TZ20 316 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 SHISA6Q6ZSJ9 500 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 BMP8AQ7Z5Y6 402 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 PRR18Q8N4B5 295 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 KDM1BQ8NB78 822 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 ANKMY1Q9P2S6 941 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 RIMBP3CA6NJZ7 1639 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 RIMBP3BA6NNM3 1639 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 RIMBP3Q9UFD9 1639 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 F5H5P2 479 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 MAPK14Q16539 360 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 C6orf132Q5T0Z8 1188 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 GLT8D1Q68CQ7 371 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 CNTNAP3BQ96NU0 1288 aa7.16□□□□□ -1.26
RIF1-201ENST00000243326 DGAT2Q96PD7 388 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms