RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Dapl1Q9D757 107 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm11397F6V5V4 377 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Kcng2F7A6P6 480 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vmn1r12G5E8G1 307 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Adh1P00329 375 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Mc3rP33033 323 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Csf3rP40223 837 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 SirpaP97797 513 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tmem248Q3TBN1 314 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tmem64Q3U145 381 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Zp1Q62005 623 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ppp3r1Q63810 170 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Serpinb9fQ80UK5 377 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Coq4Q8BGB8 266 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 B4gat1Q8BWP8 415 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 ManbaQ8K2I4 879 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Dusp15Q8R4V2 235 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 TapbplQ8VD31 451 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 SgtbQ8VD33 304 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr691Q8VGW5 322 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Idh3aQ9D6R2 366 aaKnown RBP11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vmn2r41E9Q5C7 852 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vmn2r40F6W043 852 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vmn2r36K7N741 852 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Socs2O35717 198 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Q3V0E1 1183 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 SargQ8BI29 606 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Q8C3W1 322 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Acsm1Q91VA0 573 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 MrgprhQ99MT8 321 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Srfbp1Q9CZ91 441 aaKnown RBP11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cyp4a30bA0A087WS15 508 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr1206A2ATJ9 307 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 CyctP00015 105 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hoxd8P23463 289 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tas2r7P59530 312 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ctu2Q3U308 514 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Uts2bQ765I1 113 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Shisa7Q8C3Q5 558 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Mettl7a1Q8C6B0 244 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Blzf1Q8R2X8 403 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Slc5a9Q8VDT1 685 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Oas3Q8VI93 1138 aaKnown RBP11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 FtmtQ9D5H4 237 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cers4Q9D6J1 393 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gpr88Q9EPB7 384 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Igkv5-39A0A0G2JDV4 115 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm5141A0A0J9YUW3 581 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm13271B1AYH9 182 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Galntl6E5D8G1 601 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm3149E9PW52 257 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm21103E9Q2Q1 267 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm19965J3QNY8 723 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm8362K7N6Y6 257 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 PigfO09101 219 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hcn3O88705 779 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cfl1P18760 166 aaKnown RBP11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hmx2P43687 273 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Mapk14P47811 360 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Kcnab3P97382 249 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rpa2Q62193 270 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 MastlQ8C0P0 865 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Entpd8Q8K0L2 497 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Itgb3bpQ9CQ82 176 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rpl34Q9D1R9 117 aaKnown RBP11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 IcmtQ9EQK7 283 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rai2Q9QVY8 529 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Padi4Q9Z183 666 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cldn6Q9Z262 219 aa11.28□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hs3st4D3YVV6 449 aa11.27□□□□□ -0.6
Pcif1-201ENSMUST00000041643 JunbP09450 344 aaKnown RBP11.27□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Klk1P15947 261 aa11.27□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cnih3Q6ZWS4 160 aa11.27□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr290Q7TS13 315 aa11.27□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Prss50Q8BLH5 439 aa11.27□□□□□ -0.6
Pcif1-201ENSMUST00000041643 NarsQ8BP47 559 aa11.27□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Abhd18Q8C1A9 464 aa11.27□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr689Q8VG18 320 aa11.27□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Serpinb9gQ8VHQ1 377 aa11.27□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Nectin3Q9JLB9 549 aa11.27□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Zfp945E9PYM8 794 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Mllt10O54826 1068 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Abcb1aP21447 1276 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Rpl6P47911 296 aaKnown RBP11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 CtrcQ3SYP2 268 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Xrra1Q3U3V8 786 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Lamp3Q7TST5 411 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 B130006D01RikQ8BRH6 153 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Mterf1aQ8CHZ9 379 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Sec61a2Q9JLR1 476 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 H2afb1S4R1E0 115 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 H2afb3S4R1G7 115 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Gm42372A0A1B0GT27 204 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tox2A2A472 547 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Mgl2A9XX86 381 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Pgbd5D3YZI9 523 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Tnfrsf1bP25119 474 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 IhhP97812 411 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Banf2Q8BVR0 90 aa11.27□□□□□ -0.61
Pcif1-201ENSMUST00000041643 Dppa4Q8CCG4 296 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 66.7 ms