RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 NEPROQ6NW34 567 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CLEC4GQ6UXB4 293 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 RFLNAQ6ZTI6 216 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CCDC36Q8IYA8 594 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 PRR22Q8IZ63 422 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SVOPLQ8N434 492 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 OR6S1Q8NH40 331 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SLC35C1Q96A29 364 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SPSB1Q96BD6 273 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 GBP5Q96PP8 586 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CYSTM1Q9H1C7 97 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 BICC1Q9H694 974 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 EXOSC3Q9NQT5 275 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 MMP26Q9NRE1 261 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 PCDHB16Q9NRJ7 776 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 HACD3Q9P035 362 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 DPM3Q9P2X0 92 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 KLHDC2Q9Y2U9 406 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CEP170Q5SW79 1584 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CSPG4Q6UVK1 2322 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 IGHV7-81A0A0B4J1V7 117 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CCDC189A1A4V9 331 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 FLRT2O43155 660 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 LYPLA1O75608 230 aaPredicted RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 TSPAN9O75954 239 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CELF2O95319 508 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 HPP00738 406 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 OAS1P00973 400 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 ADRB3P13945 408 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF823P16415 610 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 ERCC2P18074 760 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 EPORP19235 508 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 KLK2P20151 261 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 BRCC3P46736 316 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 MAPK12P53778 367 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 GALCP54803 685 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 PFN3P60673 137 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SQLEQ14534 574 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 ELAVL3Q14576 367 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SLC17A1Q14916 467 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CDKN3Q16667 212 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 LACTB2Q53H82 288 aaPredicted RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 ASPRV1Q53RT3 343 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 TFDP3Q5H9I0 405 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 LEMD1Q68G75 181 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CAPN13Q6MZZ7 669 aaPredicted RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CES5AQ6NT32 575 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 WDR74Q6RFH5 385 aaPredicted RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 LINC00696Q6ZRV3 163 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CCDC186Q7Z3E2 898 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 RANBP3LQ86VV4 465 aaPredicted RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 RNF130Q86XS8 419 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 WDR75Q8IWA0 830 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 NIPA2Q8N8Q9 360 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 GBP7Q8N8V2 638 aaPredicted RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 TMEM178AQ8NBL3 297 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 TMEM158Q8WZ71 300 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 ADIPOR1Q96A54 375 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SGF29Q96ES7 293 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 MAGED4Q96JG8 741 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SPRR2FQ96RM1 72 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CDRT15Q96T59 188 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 MCHR1Q99705 422 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 NPAS2Q99743 824 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 PSD2Q9BQI7 771 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SLC30A2Q9BRI3 323 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 ALKBH7Q9BT30 221 aaPredicted RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SLC2A11Q9BYW1 496 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SNX25Q9H3E2 840 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 EHD1Q9H4M9 534 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 NT5DC2Q9H857 520 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 MINDY3Q9H8M7 445 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 RRN3Q9NYV6 651 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SPRR3Q9UBC9 169 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 PRODH2Q9UF12 536 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 TBC1D29Q9UFV1 150 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 NRBP1Q9UHY1 535 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 RASD1Q9Y272 281 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 STYXL1Q9Y6J8 313 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 KAT6BQ8WYB5 2073 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 IGKV2-28A0A075B6P5 120 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 TRAV9-2A0A087WT02 112 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 ZNF705EA8MWA4 302 aaPredicted RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 C10orf142B7Z368 130 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 MLNRO43193 412 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 IGKV2D-28P01615 120 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CD74P04233 296 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 FDPSP14324 419 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 GJB2P29033 226 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 ALDH3B1P43353 468 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 DNA2P51530 1060 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 SLC7A2P52569 658 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 CLNS1AP54105 237 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 PTENP60484 403 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 RND3P61587 244 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 FUT7Q11130 342 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 ZRSR2Q15696 482 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 FUT11Q495W5 492 aa-0.19□□□□□ -2.44
CCDC7-215ENST00000639629 AGBL2Q5U5Z8 902 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms