RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 IPO7O95373 1038 aaKnown RBP16.35■□□□□ 0.21
CLN6-212ENST00000636020 AHSGP02765 367 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 CCDC175P0C221 793 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 ABCD3P28288 659 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 HNMTP50135 292 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 RPS13P62277 151 aaKnown RBP16.35■□□□□ 0.21
CLN6-212ENST00000636020 BCL2A1Q16548 175 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 AP5B1Q2VPB7 878 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 HLA-DQA1Q5Y7H0 255 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 C18orf63Q68DL7 685 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 DESI1Q6ICB0 168 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 FIG4Q92562 907 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 TNFRSF13CQ96RJ3 184 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 EGFL8Q99944 293 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 OSBPL11Q9BXB4 747 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 CAPS2Q9BXY5 557 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 MS4A8Q9BY19 250 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 PHACTR1Q9C0D0 580 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 GALNT9Q9HCQ5 603 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 MS4A12Q9NXJ0 267 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 MGAM2Q2M2H8 2515 aa16.35■□□□□ 0.21
CLN6-212ENST00000636020 WASHC1A8K0Z3 465 aa16.34■□□□□ 0.21
CLN6-212ENST00000636020 GPR75O95800 540 aa16.34■□□□□ 0.21
CLN6-212ENST00000636020 GALNSP34059 522 aa16.34■□□□□ 0.21
CLN6-212ENST00000636020 VLDLRP98155 873 aa16.34■□□□□ 0.21
CLN6-212ENST00000636020 SLAMF1Q13291 335 aa16.34■□□□□ 0.21
CLN6-212ENST00000636020 FGFBP1Q14512 234 aa16.34■□□□□ 0.21
CLN6-212ENST00000636020 CHMP1BQ7LBR1 199 aa16.34■□□□□ 0.21
CLN6-212ENST00000636020 RAB3IL1Q8TBN0 382 aa16.34■□□□□ 0.21
CLN6-212ENST00000636020 HGDQ93099 445 aa16.34■□□□□ 0.21
CLN6-212ENST00000636020 NODALQ96S42 347 aa16.34■□□□□ 0.21
CLN6-212ENST00000636020 RHNO1Q9BSD3 238 aa16.34■□□□□ 0.21
CLN6-212ENST00000636020 ESRP2Q9H6T0 727 aaKnown RBP16.34■□□□□ 0.21
CLN6-212ENST00000636020 XAB2Q9HCS7 855 aaKnown RBP16.34■□□□□ 0.21
CLN6-212ENST00000636020 GPRC5BQ9NZH0 403 aa16.34■□□□□ 0.21
CLN6-212ENST00000636020 MAGED1Q9Y5V3 778 aaPredicted RBP16.34■□□□□ 0.21
CLN6-212ENST00000636020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.33■□□□□ 0.2
CLN6-212ENST00000636020 IGHV4-30-2A0A087WSY4 118 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 PRKRAO75569 313 aaKnown RBP16.33■□□□□ 0.2
CLN6-212ENST00000636020 NAGAP17050 411 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 SRD5A1P18405 259 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 KRT15P19012 456 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 CD22P20273 847 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 SSR2P43308 183 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 MAGEA3P43357 314 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 CASP9P55211 416 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 SNTA1Q13424 505 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 DOC2AQ14183 400 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 GUSBP1Q15486 140 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 TRIP13Q15645 432 aaPredicted RBP16.33■□□□□ 0.2
CLN6-212ENST00000636020 EXOC3L2Q2M3D2 409 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 TMEM35AQ53FP2 167 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 UBAP2Q5T6F2 1119 aaKnown RBP16.33■□□□□ 0.2
CLN6-212ENST00000636020 STAC2Q6ZMT1 411 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 GPR180Q86V85 440 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 WFDC8Q8IUA0 241 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 ARIH2OSQ8N7S6 290 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 ZNF615Q8N8J6 731 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 MCUQ8NE86 351 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 C17orf47Q8NEP4 570 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 SMAP2Q8WU79 429 aaPredicted RBP16.33■□□□□ 0.2
CLN6-212ENST00000636020 FBXW5Q969U6 566 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 RHBDF1Q96CC6 855 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 WDR34Q96EX3 536 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 SIGLEC10Q96LC7 697 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 SFXN2Q96NB2 322 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 GDF2Q9UK05 429 aaPredicted RBP16.33■□□□□ 0.2
CLN6-212ENST00000636020 PROCRQ9UNN8 238 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 VWA7Q9Y334 891 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 OARD1Q9Y530 152 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 TENM1Q9UKZ4 2725 aa16.33■□□□□ 0.2
CLN6-212ENST00000636020 NPEPPSL1A6NEC2 478 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 GOLGA8MH3BSY2 632 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 ABCB7O75027 752 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 PPM1BO75688 479 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 SRD5A2P31213 254 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 TLX1P31314 330 aaPredicted RBP16.32■□□□□ 0.2
CLN6-212ENST00000636020 VPS41P49754 854 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 TNFRSF17Q02223 184 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 KIF5AQ12840 1032 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 NUP54Q7Z3B4 507 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 OR10H5Q8NGA6 315 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 ZNF473Q8WTR7 871 aaKnown RBP16.32■□□□□ 0.2
CLN6-212ENST00000636020 PTCD3Q96EY7 689 aaKnown RBP16.32■□□□□ 0.2
CLN6-212ENST00000636020 HS6ST2Q96MM7 605 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 SORBS1Q9BX66 1292 aaKnown RBP16.32■□□□□ 0.2
CLN6-212ENST00000636020 RNF122Q9H9V4 155 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 CXorf21Q9HAI6 301 aa16.32■□□□□ 0.2
CLN6-212ENST00000636020 BARX1Q9HBU1 254 aaPredicted RBP16.32■□□□□ 0.2
CLN6-212ENST00000636020 MRPS18CQ9Y3D5 142 aaKnown RBP16.32■□□□□ 0.2
CLN6-212ENST00000636020 CLGNO14967 610 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 SH3BGRLO75368 114 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 AIFM1O95831 613 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 PGRP06401 933 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 SLC35E2BP0CK96 405 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 SLC35E2P0CK97 266 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 CFPP27918 469 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 HNRNPH2P55795 449 aaKnown RBP16.31■□□□□ 0.2
CLN6-212ENST00000636020 CLDN15P56746 228 aa16.31■□□□□ 0.2
CLN6-212ENST00000636020 LOXL1Q08397 574 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms