RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 TRNT1Q96Q11 434 aaKnown RBP13.36□□□□□ -0.27
LIMS4-204ENST00000632897 ING2Q9H160 280 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 KRT84Q9NSB2 600 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 DDX18Q9NVP1 670 aaKnown RBP13.36□□□□□ -0.27
LIMS4-204ENST00000632897 SEC14L3Q9UDX4 400 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 KCND3Q9UK17 655 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 PLCL2Q9UPR0 1127 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 TESMINQ9Y4I5 508 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 HSPE1-MOB4S4R3N1 261 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 TDRD6O60522 2096 aaKnown RBP13.36□□□□□ -0.27
LIMS4-204ENST00000632897 A0A087WV62 115 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 BCKDKO14874 412 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 CASC3O15234 703 aaKnown RBP13.36□□□□□ -0.27
LIMS4-204ENST00000632897 SDC3O75056 442 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 DNAJB6O75190 326 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 SEC24DO94855 1032 aaPredicted RBP13.36□□□□□ -0.27
LIMS4-204ENST00000632897 RECKO95980 971 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 ATP1B1P05026 303 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 ANXA8P13928 327 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 RYKP34925 604 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 PIGAP37287 484 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 CDH12P55289 794 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 SHC2P98077 582 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 FUT5Q11128 374 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 TOP3AQ13472 1001 aaPredicted RBP13.36□□□□□ -0.27
LIMS4-204ENST00000632897 LTB4RQ15722 352 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 DEFB110Q30KQ9 67 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 INAVAQ3KP66 663 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 ZNF628Q5EBL2 1059 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 RBM48Q5RL73 367 aaKnown RBP13.36□□□□□ -0.27
LIMS4-204ENST00000632897 RNF220Q5VTB9 566 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 ZNF691Q5VV52 312 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 CDC73Q6P1J9 531 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 FAM92BQ6ZTR7 304 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 PRSS41Q7RTY9 318 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 WDR5BQ86VZ2 330 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 TTC29Q8NA56 475 aaPredicted RBP13.36□□□□□ -0.27
LIMS4-204ENST00000632897 SUMF1Q8NBK3 374 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 OR7G2Q8NG99 324 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 ZNF675Q8TD23 568 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 KAT2AQ92830 837 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 C16orf58Q96GQ5 468 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 UCKL1Q9NWZ5 548 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 GIN1Q9NXP7 522 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 SH3GLB1Q9Y371 365 aa13.36□□□□□ -0.27
LIMS4-204ENST00000632897 CFAP54Q96N23 3096 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 A0A1B0GTW7 788 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 A0A1B0GVT2 93 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 HCRTR1O43613 425 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 NUDT21O43809 227 aaKnown RBP13.35□□□□□ -0.27
LIMS4-204ENST00000632897 MITFO75030 526 aaPredicted RBP13.35□□□□□ -0.27
LIMS4-204ENST00000632897 CHRM4P08173 479 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 GNSP15586 552 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 CNR2P34972 360 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 PTGER1P34995 402 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 MLLT3P42568 568 aaPredicted RBP13.35□□□□□ -0.27
LIMS4-204ENST00000632897 CTSKP43235 329 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 GPR3P46089 330 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 LIMS1P48059 325 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 GABRA4P48169 554 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 EMP3P54852 163 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 FAM53BQ14153 422 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 LAPTM4AQ15012 233 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 MICAQ29983 383 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 FAM214AQ32MH5 1076 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 TCTE1Q5JU00 501 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 FOXB2Q5VYV0 432 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 MFSD12Q6NUT3 480 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 OR10G2Q8NGC3 310 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 HDAC2Q92769 488 aaKnown RBP13.35□□□□□ -0.27
LIMS4-204ENST00000632897 TGM7Q96PF1 710 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 YIPF4Q9BSR8 244 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 PINK1Q9BXM7 581 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 GABARAPL3Q9BY60 117 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 GRIP2Q9C0E4 1043 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 RIBC2Q9H4K1 309 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 CXorf56Q9H5V9 222 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 TRIM45Q9H8W5 580 aaPredicted RBP13.35□□□□□ -0.27
LIMS4-204ENST00000632897 PDE7BQ9NP56 450 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 STARD5Q9NSY2 213 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 TMEM74BQ9NUR3 256 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 C19orf53Q9UNZ5 99 aaPredicted RBP13.35□□□□□ -0.27
LIMS4-204ENST00000632897 CLCA2Q9UQC9 943 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 RNF215Q9Y6U7 377 aa13.35□□□□□ -0.27
LIMS4-204ENST00000632897 EP300Q09472 2414 aaPredicted RBP13.34□□□□□ -0.27
LIMS4-204ENST00000632897 SPTBN4Q9H254 2564 aa13.34□□□□□ -0.27
LIMS4-204ENST00000632897 OTOGLQ3ZCN5 2332 aa13.34□□□□□ -0.27
LIMS4-204ENST00000632897 SGK494L7N484 410 aa13.34□□□□□ -0.27
LIMS4-204ENST00000632897 SYT5O00445 386 aa13.34□□□□□ -0.27
LIMS4-204ENST00000632897 FGF17O60258 216 aa13.34□□□□□ -0.27
LIMS4-204ENST00000632897 PLOD3O60568 738 aa13.34□□□□□ -0.27
LIMS4-204ENST00000632897 RDH16O75452 317 aa13.34□□□□□ -0.27
LIMS4-204ENST00000632897 GADD45GO95257 159 aa13.34□□□□□ -0.27
LIMS4-204ENST00000632897 ZBTB11O95625 1053 aaPredicted RBP13.34□□□□□ -0.27
LIMS4-204ENST00000632897 RNH1P13489 461 aaKnown RBP13.34□□□□□ -0.27
LIMS4-204ENST00000632897 ALDH3B2P48448 385 aa13.34□□□□□ -0.27
LIMS4-204ENST00000632897 PPM1FP49593 454 aaPredicted RBP13.34□□□□□ -0.27
LIMS4-204ENST00000632897 HLCSP50747 726 aa13.34□□□□□ -0.27
LIMS4-204ENST00000632897 SMIM11AP58511 58 aa13.34□□□□□ -0.27
LIMS4-204ENST00000632897 NR1D2Q14995 579 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms