RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 HLCSP50747 726 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 BMXP51813 675 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 SNRPNP63162 240 aaKnown RBP7.09□□□□□ -1.27
PKP4-217ENST00000628904 INAQ16352 499 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 HYAL4Q2M3T9 481 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 C8orf82Q6P1X6 216 aaPredicted RBP7.09□□□□□ -1.27
PKP4-217ENST00000628904 USP30Q70CQ3 517 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 RIMKLAQ8IXN7 391 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 PACRGLQ8N7B6 248 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 OR4K5Q8NGD3 323 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 ATOH1Q92858 354 aaPredicted RBP7.09□□□□□ -1.27
PKP4-217ENST00000628904 HSPA12BQ96MM6 686 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 FOXN4Q96NZ1 517 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 FAM117AQ9C073 453 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 BHLHE41Q9C0J9 482 aaPredicted RBP7.09□□□□□ -1.27
PKP4-217ENST00000628904 NRSN2Q9GZP1 204 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 MVB12BQ9H7P6 319 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 POLMQ9NP87 494 aaPredicted RBP7.09□□□□□ -1.27
PKP4-217ENST00000628904 ERGIC3Q9Y282 383 aa7.09□□□□□ -1.27
PKP4-217ENST00000628904 TCF20Q9UGU0 1960 aaKnown RBP7.09□□□□□ -1.28
PKP4-217ENST00000628904 TLR4O00206 839 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 RNASET2O00584 256 aaKnown RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 GUCY1B2O75343 617 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 BCAS1O75363 584 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 TNFP01375 233 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 CFIP05156 583 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 ALPPP05187 535 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 ALOX5P09917 674 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 DHPSP49366 369 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 CAV3P56539 151 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 NDUFAF6Q330K2 333 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 DDI2Q5TDH0 399 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 FAM71E1Q6IPT2 247 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 SPATC1Q76KD6 591 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 CCDC103Q8IW40 242 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 SLC15A4Q8N697 577 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 ZNF655Q8N720 491 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 CSNK1A1LQ8N752 337 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 MFSD2AQ8NA29 543 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 TEX47Q8TBZ9 253 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 CNRIP1Q96F85 164 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 GAS2L1Q99501 681 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 MCHR1Q99705 422 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 BRF2Q9HAW0 419 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 ACTR10Q9NZ32 417 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 CPNE7Q9UBL6 633 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 RNF6Q9Y252 685 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 CAB39Q9Y376 341 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 HCN4Q9Y3Q4 1203 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 RHPN2P1A8MT19 583 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 H0YGG7 62 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 SCN2BO60939 215 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 MYL12AP19105 171 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 PAICSP22234 425 aaKnown RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 ARF3P61204 181 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 KCNJ10P78508 379 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 PPP2R2BQ00005 443 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 DUSP2Q05923 314 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 TOP3AQ13472 1001 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 ZNF630Q2M218 657 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 GGTA1PQ4G0N0 100 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 SHQ1Q6PI26 577 aaKnown RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 LCTLQ6UWM7 567 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 UNC5DQ6UXZ4 953 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 BTLAQ7Z6A9 289 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 NRMQ8IXM6 262 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 POC5Q8NA72 575 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 FAM174AQ8TBP5 190 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 OR5P2Q8WZ92 322 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 EZH1Q92800 747 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 LRR1Q96L50 414 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 CCDC115Q96NT0 180 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 PIP5K1AQ99755 562 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 TMED9Q9BVK6 235 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 TSSK6Q9BXA6 273 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 MED20Q9H944 212 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 SLC6A20Q9NP91 592 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 DZANK1Q9NVP4 752 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 C14orf119Q9NWQ9 140 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 PAK1IP1Q9NWT1 392 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 TRNAU1APQ9NX07 287 aaKnown RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 ZNF624Q9P2J8 865 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 SPIN1Q9Y657 262 aaPredicted RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 PATJQ8NI35 1801 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 ZC3H12DA2A288 527 aaKnown RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 CTSVO60911 334 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 REM1O75628 298 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 SDHBP21912 280 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 GADD45AP24522 165 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 ATP5A1P25705 553 aaKnown RBP7.08□□□□□ -1.28
PKP4-217ENST00000628904 NFATC3Q12968 1075 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 IQCCQ4KMZ1 466 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 SLC44A3Q8N4M1 653 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 OR4K14Q8NGD5 310 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 ZFPM2Q8WW38 1151 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 GATAD2BQ8WXI9 593 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 PTCHD1Q96NR3 888 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 OR5M11Q96RB7 305 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 MAP3K3Q99759 626 aa7.08□□□□□ -1.28
PKP4-217ENST00000628904 SGPP1Q9BX95 441 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms