RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	SAT2	Q96F10	170 aa	Predicted RBP	13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	COG8	Q96MW5	612 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	SLC2A11	Q9BYW1	496 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	TIMP2	P16035	220 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	GPR4	P46093	362 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	ACY1	Q03154	408 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	CCDC71L	Q8N9Z2	235 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	NGB	Q9NPG2	151 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	CACNA1F	O60840	1977 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	RNF225	M0QZC1	329 aa	Predicted RBP	13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	POLR1C	O15160	346 aa	Predicted RBP	13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	SOX30	O94993	753 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	CER1	O95813	267 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	CKMT2	P17540	419 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	CAPN3	P20807	821 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	GDF1	P27539	372 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	EMX2	Q04743	252 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	SLC22A16	Q86VW1	577 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	TPRA1	Q86W33	373 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	ZNF695	Q8IW36	515 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	KIAA1191	Q96A73	305 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	SERTAD4	Q9NUC0	356 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	DNAJB4	Q9UDY4	337 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	GABRQ	Q9UN88	632 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	RIMBP3C	A6NJZ7	1639 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	RIMBP3B	A6NNM3	1639 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	RIMBP3	Q9UFD9	1639 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	TCRBV7S3A2	A0A539	114 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672		F5H5K5	113 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	RFPL2	O75678	378 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	POU3F2	P20265	443 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	HK3	P52790	923 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	TUBA1B	P68363	451 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	TUBA4A	P68366	448 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	MVK	Q03426	396 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	KHDC1L	Q5JSQ8	128 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	TUBA1A	Q71U36	451 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	NPRL2	Q8WTW4	380 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	SORCS1	Q8WY21	1168 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	TMEM165	Q9HC07	324 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	LIPT1	Q9Y234	373 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	WNT7A	O00755	349 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	GJB5	O95377	273 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	LCK	P06239	509 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	CX3CR1	P49238	355 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	GSK3B	P49841	420 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	CMTM1	Q8IZ96	169 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	ZNF619	Q8N2I2	560 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	OR4D6	Q8NGJ1	314 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	ATOH1	Q92858	354 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	RAB39B	Q96DA2	213 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	MALSU1	Q96EH3	234 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	SYT3	Q9BQG1	590 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	NOCT	Q9UK39	431 aa	Known RBP	13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	BEST1	O76090	585 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	TSFM	P43897	325 aa	Known RBP	13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	EEF1A1	P68104	462 aa	Known RBP	13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	ARHGAP11A	Q6P4F7	1023 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	LRIG1	Q96JA1	1093 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672		M0R233	179 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	DEFB133	Q30KQ1	61 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	OR52E8	Q6IFG1	317 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	ZNF160	Q9HCG1	818 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	SYT7	O43581	403 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	SSX4	O60224	188 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	PROS1	P07225	676 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	CES4A	Q5XG92	561 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	IL17F	Q96PD4	163 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	NXF5	Q9H1B4	397 aa	Known RBP	13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672		A0A1W2PP18	115 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	GXYLT2	A0PJZ3	443 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	PRAMEF2	O60811	474 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	RGS9	O75916	674 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	OXSR1	O95747	527 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	ALDOB	P05062	364 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	CAMLG	P49069	296 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	MANEA	Q5SRI9	462 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	AKR1C8P	Q5T2L2	129 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	GSG1L	Q6UXU4	331 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	RSC1A1	Q92681	617 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	OARD1	Q9Y530	152 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	PHYH	O14832	338 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	CRTAP	O75718	401 aa	Predicted RBP	13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	SNAPC5	O75971	98 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	CKMT1A	P12532	417 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	RPS2	P15880	293 aa	Known RBP	13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	SOX3	P41225	446 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	ACSBG2	Q5FVE4	666 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	SHISA6	Q6ZSJ9	500 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	F2RL3	Q96RI0	385 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	SECISBP2	Q96T21	854 aa	Known RBP	13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	HCAR1	Q9BXC0	346 aa		13.23	□□□□□ -0.29
NRXN1-222	ENST00000625672	ATRN	O75882	1429 aa		13.22	□□□□□ -0.29
NRXN1-222	ENST00000625672	SNHG28	P0DPA3	235 aa		13.22	□□□□□ -0.29
NRXN1-222	ENST00000625672	GCGR	P47871	477 aa		13.22	□□□□□ -0.29
NRXN1-222	ENST00000625672	ZNF280A	P59817	542 aa	Predicted RBP	13.22	□□□□□ -0.29
NRXN1-222	ENST00000625672	FIGLA	Q6QHK4	219 aa		13.22	□□□□□ -0.29
NRXN1-222	ENST00000625672	HS3ST5	Q8IZT8	346 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms