RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 NDNQ99608 321 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 NTMT1Q9BV86 223 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 PROCRQ9UNN8 238 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 MAD1L1Q9Y6D9 718 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 COMMD10Q9Y6G5 202 aa12.5□□□□□ -0.41
SNX1-214ENST00000625244 VWFP04275 2813 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 CADP27708 2225 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 RYR3Q15413 4870 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 CCDC188H7C350 402 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 CLOCKO15516 846 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 TCF21O43680 179 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 CLEC3AO75596 197 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 ITGA2P17301 1181 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 CKAP4Q07065 602 aaKnown RBP12.49□□□□□ -0.41
SNX1-214ENST00000625244 THOC5Q13769 683 aaKnown RBP12.49□□□□□ -0.41
SNX1-214ENST00000625244 SLBPQ14493 270 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNX1-214ENST00000625244 SQLEQ14534 574 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 SETDB1Q15047 1291 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 CYP1B1Q16678 543 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 DESI1Q6ICB0 168 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 CASC4Q6P4E1 433 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 IFNEQ86WN2 208 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 PRR22Q8IZ63 422 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 DEPDC4Q8N2C3 294 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 PPM1NQ8N819 430 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 TTLQ8NG68 377 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 ZMYND19Q96E35 227 aaPredicted RBP12.49□□□□□ -0.41
SNX1-214ENST00000625244 C11orf24Q96F05 449 aaPredicted RBP12.49□□□□□ -0.41
SNX1-214ENST00000625244 F2RL3Q96RI0 385 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 PHACTR1Q9C0D0 580 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 C12orf65Q9H3J6 166 aaKnown RBP12.49□□□□□ -0.41
SNX1-214ENST00000625244 GALNT9Q9HCQ5 603 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 SNX15Q9NRS6 342 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 TAS2R10Q9NYW0 307 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 RNF115Q9Y4L5 304 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 KCNE2Q9Y6J6 123 aa12.49□□□□□ -0.41
SNX1-214ENST00000625244 C2orf92A0A1B0GVN3 265 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 A0A1W2PP18 115 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 PABPN1LA6NDY0 278 aaKnown RBP12.48□□□□□ -0.41
SNX1-214ENST00000625244 SERINC4A6NH21 518 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 ELOA3DA6NLF2 546 aaPredicted RBP12.48□□□□□ -0.41
SNX1-214ENST00000625244 OR6C76A6NM76 312 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 URI1O94763 535 aaPredicted RBP12.48□□□□□ -0.41
SNX1-214ENST00000625244 C1GALT1C1LP0DN25 315 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 PTGDSP41222 190 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 KCNJ1P48048 391 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 RPP38P78345 283 aaKnown RBP12.48□□□□□ -0.41
SNX1-214ENST00000625244 BASP1P80723 227 aaKnown RBP12.48□□□□□ -0.41
SNX1-214ENST00000625244 PLIN5Q00G26 463 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 DHX34Q14147 1143 aaKnown RBP12.48□□□□□ -0.41
SNX1-214ENST00000625244 PPP1R7Q15435 360 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 ELOA3BQ3SY89 546 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 ALKBH2Q6NS38 261 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 AAGABQ6PD74 315 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 STAC2Q6ZMT1 411 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 SLCO4C1Q6ZQN7 724 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 UBE3DQ7Z6J8 389 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 CREG2Q8IUH2 290 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 WDSUB1Q8N9V3 476 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 ELOA3Q8NG57 546 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 KIF18AQ8NI77 898 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 TRAF4Q9BUZ4 470 aaPredicted RBP12.48□□□□□ -0.41
SNX1-214ENST00000625244 METTL7AQ9H8H3 244 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 MANSC1Q9H8J5 431 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 ACTR8Q9H981 624 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 PTBP2Q9UKA9 531 aaKnown RBP12.48□□□□□ -0.41
SNX1-214ENST00000625244 KCNS2Q9ULS6 477 aa12.48□□□□□ -0.41
SNX1-214ENST00000625244 EXO1Q9UQ84 846 aaKnown RBP12.48□□□□□ -0.41
SNX1-214ENST00000625244 TCRBV7S3A2A0A539 114 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 AP3B1O00203 1094 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 RTCAO00442 366 aaKnown RBP12.47□□□□□ -0.41
SNX1-214ENST00000625244 ICOSLGO75144 302 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 H2AFYO75367 372 aaKnown RBP12.47□□□□□ -0.41
SNX1-214ENST00000625244 CBR3O75828 277 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 KRT14P02533 472 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 ABCB1P08183 1280 aaPredicted RBP12.47□□□□□ -0.41
SNX1-214ENST00000625244 ALOX15P16050 662 aaPredicted RBP12.47□□□□□ -0.41
SNX1-214ENST00000625244 CPN2P22792 545 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 ATP5A1P25705 553 aaKnown RBP12.47□□□□□ -0.41
SNX1-214ENST00000625244 TMED10P49755 219 aaKnown RBP12.47□□□□□ -0.41
SNX1-214ENST00000625244 NUDT6P53370 316 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 PGGT1BP53609 377 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 CDKN2DP55273 166 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 CLDN15P56746 228 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 DEFA6Q01524 100 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 ZNF844Q08AG5 666 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 GUSBP1Q15486 140 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 KCTD19Q17RG1 926 aaPredicted RBP12.47□□□□□ -0.41
SNX1-214ENST00000625244 SPRED3Q2MJR0 410 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 ZNF672Q499Z4 452 aaPredicted RBP12.47□□□□□ -0.41
SNX1-214ENST00000625244 CLEC2AQ6UVW9 174 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 CHMP1BQ7LBR1 199 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 RFLNBQ8N5W9 214 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 ACOT4Q8N9L9 421 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 BBOF1Q8ND07 529 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 TP53INP1Q96A56 240 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 ZNF669Q96BR6 464 aaPredicted RBP12.47□□□□□ -0.41
SNX1-214ENST00000625244 SFXN2Q96NB2 322 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 NODALQ96S42 347 aa12.47□□□□□ -0.41
SNX1-214ENST00000625244 TRIM54Q9BYV2 358 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms