RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 MAT1AQ00266 395 aaKnown RBP11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 PIGFQ07326 219 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 MYBPC3Q14896 1274 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 NDUFA9Q16795 377 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 IFI44LQ53G44 452 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 CRB2Q5IJ48 1285 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 WDR53Q7Z5U6 358 aaPredicted RBP11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 HIPK1Q86Z02 1210 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 ARHGEF39Q8N4T4 335 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 ZNF555Q8NEP9 628 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 OR7G2Q8NG99 324 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 CCDC74AQ96AQ1 378 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 MOAP1Q96BY2 351 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 RIBC2Q9H4K1 309 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 LIN28AQ9H9Z2 209 aaKnown RBP11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 PAPOLBQ9NRJ5 636 aaKnown RBP11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 ENAMQ9NRM1 1142 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 TESMINQ9Y4I5 508 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 CABIN1Q9Y6J0 2220 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 DMDP11532 3685 aa11.92□□□□□ -0.5
TNFAIP3-209ENST00000619035 A0A087WXM4 84 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 LOC100130705A0A1B0GUX0 176 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 HYKKA2RU49 373 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 CPED1A4D0V7 1026 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 PATE3B3GLJ2 98 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 J3KTA2 159 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 EEF1B2P24534 225 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 IGFBP5P24593 272 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 PPP2R1BP30154 601 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 CSF2RBP32927 897 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 RAB38P57729 211 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 CFHR1Q03591 330 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 FAM111BQ6SJ93 734 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 PLXDC1Q8IUK5 500 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 C8orf59Q8N0T1 100 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 SIMC1Q8NDZ2 872 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 OR2I1PQ8NGU4 316 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 OR52J3Q8NH60 311 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 PEX11GQ96HA9 241 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 SPRTNQ9H040 489 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 THUMPD1Q9NXG2 353 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 PCDH15Q96QU1 1955 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 CCDC88CQ9P219 2028 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 PRAMEF27A3QJZ7 478 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 AGRPO00253 132 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 FOXS1O43638 330 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 BMP10O95393 424 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 NT5EP21589 574 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 PCSK6P29122 969 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 RRM2P31350 389 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 DNAJA1P31689 397 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 GABRA4P48169 554 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 ANXA11P50995 505 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 EMP3P54852 163 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 ELOAQ14241 798 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 MAPK11Q15759 364 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 NEDD8Q15843 81 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 LPAL2Q16609 132 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 SYT16Q17RD7 645 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 GPAT3Q53EU6 434 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 LAIR2Q6ISS4 152 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 KANSL1Q7Z3B3 1105 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 THAP5Q7Z6K1 395 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 HMGN2P46Q86SG4 172 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 MMABQ96EY8 250 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 ZNF285Q96NJ3 590 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 COL21A1Q96P44 957 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 TREX2Q9BQ50 279 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 GAREM1Q9H706 876 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 NDUFA13Q9P0J0 144 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 KCNE3Q9Y6H6 103 aa11.91□□□□□ -0.5
TNFAIP3-209ENST00000619035 TRIM64A6NGJ6 449 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 TMEM150CB9EJG8 249 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 GPR75O95800 540 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 FESP07332 822 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 CDH2P19022 906 aaPredicted RBP11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 CD1CP29017 333 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 ITGA1P56199 1179 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 TUBA4AP68366 448 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 HSD11B2P80365 405 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 CD47Q08722 323 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 PMS2P3Q13401 168 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 RAPSNQ13702 412 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 ERV3-1Q14264 604 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 DUSP7Q16829 419 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 TRMT12Q53H54 448 aaKnown RBP11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 TCTE1Q5JU00 501 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 GARNL3Q5VVW2 1013 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 TTC23Q5W5X9 447 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 CNIH3Q8TBE1 160 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 SAP25Q8TEE9 199 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 TANKQ92844 425 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 OR7D2Q96RA2 312 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 ZNF607Q96SK3 696 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 NUDT22Q9BRQ3 303 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 SYNDIG1Q9H7V2 258 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 REEP1Q9H902 201 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 NDUFAF4Q9P032 175 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 SEMA5BQ9P283 1151 aa11.9□□□□□ -0.5
TNFAIP3-209ENST00000619035 C3orf18Q9UK00 162 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms