RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 OR5R1Q8NH85 324 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ATP5SQ99766 215 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 NXF5Q9H1B4 397 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 TMEM60Q9H2L4 133 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 PVALBP20472 110 aaPredicted RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 ZBTB6Q15916 424 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 LRRC66Q68CR7 880 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 GDPD3Q7L5L3 318 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 KLHDC9Q8NEP7 349 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 INTS12Q96CB8 462 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 LIN37Q96GY3 246 aaPredicted RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 REEP1Q9H902 201 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 SLC52A3Q9NQ40 469 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 C12orf4Q9NQ89 552 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 GRHL1Q9NZI5 618 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CLEC4AQ9UMR7 237 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 PRR19A6NJB7 356 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 C9IYK1 514 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CLDN5O00501 218 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 UBL3O95164 117 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 GPIP06744 558 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 NDUFA8P51970 172 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 HK3P52790 923 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 EMP3P54852 163 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 SPANXN2Q5MJ10 180 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 GPRC6AQ5T6X5 926 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 BNC2Q6ZN30 1099 aaPredicted RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 EPS8L3Q8TE67 593 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 DPH3Q96FX2 82 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CNOT6Q9ULM6 557 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 RNF215Q9Y6U7 377 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 OR14I1A6ND48 311 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 E7ENQ6 273 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CLEC3BP05452 202 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 YES1P07947 543 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ZP2Q05996 745 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CAMK2BQ13554 666 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CDCA2Q69YH5 1023 aaPredicted RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 XKRXQ6PP77 449 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 HTR3DQ70Z44 454 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 FIBINQ8TAL6 211 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 AP3S1Q92572 193 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 S1PR5Q9H228 398 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ACTR10Q9NZ32 417 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 MYBPHLA2RUH7 354 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 LOC110117498-PIK3R3F6TDL0 507 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 DOK2O60496 412 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CHGBP05060 677 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 ZNF44P15621 663 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 UQCRFS1P47985 274 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 RPS4XP62701 263 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 IL17DQ8TAD2 202 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 PIK3R3Q92569 461 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 KAT2BQ92831 832 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 RPL3LQ92901 407 aaKnown RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 CPNE4Q96A23 557 aaPredicted RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 TXNDC15Q96J42 360 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 TNFRSF13CQ96RJ3 184 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 NKX3-1Q99801 234 aaPredicted RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 SCN3AQ9NY46 2000 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 THAP10Q9P2Z0 257 aaPredicted RBP3.18□□□□□ -1.9
LPP-220ENST00000617246 EBF1Q9UH73 591 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 CYTH4Q9UIA0 394 aa3.18□□□□□ -1.9
LPP-220ENST00000617246 SSU72P8A0A1W2PR75 194 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 RNF212BA8MTL3 300 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 HOXC11O43248 304 aaPredicted RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 EIF1BO60739 113 aaKnown RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 KLHL2O95198 593 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 FAM58BPP0C7Q3 252 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 TAL1P17542 331 aaPredicted RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 MAP3K8P41279 467 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 GABRA2P47869 451 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 POLE2P56282 527 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 CLDN2P57739 230 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 PRPS1P60891 318 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 AUHQ13825 339 aaKnown RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 CD276Q5ZPR3 534 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 CLEC20AQ6ZU45 233 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SLC38A5Q8WUX1 472 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SLC35F5Q8WV83 523 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 MEMO1Q9Y316 297 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ANHXE9PGG2 379 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ST8SIA5O15466 376 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 GALR3O60755 368 aaPredicted RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 ALOX12BO75342 701 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ACSL3O95573 720 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 UCHL3P15374 230 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 ZNF182P17025 639 aaPredicted RBP3.17□□□□□ -1.9
LPP-220ENST00000617246 SSTR1P30872 391 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 SERPINB5P36952 375 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 DEFA1P59665 94 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 DEFA3P59666 94 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 MAXP61244 160 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 COL28A1Q2UY09 1125 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 PM20D1Q6GTS8 502 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 C10orf107Q8IVU9 208 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 RHEBL1Q8TAI7 183 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 PAQR8Q8TEZ7 354 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 RLN3Q8WXF3 142 aa3.17□□□□□ -1.9
LPP-220ENST00000617246 TMEM208Q9BTX3 173 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms