RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 NEIL3Q8TAT5 605 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 SNX33Q8WV41 574 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 HHIPL1Q96JK4 782 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 ZFP3Q96NJ6 502 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 CD180Q99467 661 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 BEX2Q9BXY8 128 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 RC3H2Q9HBD1 1191 aaKnown RBP8.22□□□□□ -1.09
LIG4-204ENST00000611712 THSD1Q9NS62 852 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 TEX10Q9NXF1 929 aaPredicted RBP8.22□□□□□ -1.09
LIG4-204ENST00000611712 NLGN3Q9NZ94 848 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 CCDC59Q9P031 241 aaKnown RBP8.22□□□□□ -1.09
LIG4-204ENST00000611712 ANKMY1Q9P2S6 941 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 SPATA2Q9UM82 520 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 LIPT1Q9Y234 373 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 RALGAPA2Q2PPJ7 1873 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 A0A1W2PQU0 124 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 OR6C70A6NIJ9 312 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 MAGEA8P43361 318 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 GIPRP48546 466 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 SLC9A3P48764 834 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 FBXW4P57775 412 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 HOXC5Q00444 222 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 BNC1Q01954 994 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 SLC3A1Q07837 685 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 CST6Q15828 149 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 AGAP7PQ5VUJ5 663 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 MLIPQ5VWP3 458 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 LINC00299Q6ZSB3 139 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 SLC16A12Q6ZSM3 486 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 OLIG3Q7RTU3 272 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 NRROSQ86YC3 692 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 GALNT12Q8IXK2 581 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 GHDCQ8N2G8 530 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 ZNF433Q8N7K0 673 aaPredicted RBP8.22□□□□□ -1.09
LIG4-204ENST00000611712 TMIEQ8NEW7 156 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 MOAP1Q96BY2 351 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 RBM18Q96H35 190 aaKnown RBP8.22□□□□□ -1.09
LIG4-204ENST00000611712 RIPOR3Q96MK2 946 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 GABARAPL3Q9BY60 117 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 SLITRK2Q9H156 845 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 EPHX3Q9H6B9 360 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 FZD3Q9NPG1 666 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 CARD8Q9Y2G2 431 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 TMA7Q9Y2S6 64 aaKnown RBP8.22□□□□□ -1.09
LIG4-204ENST00000611712 KLK4Q9Y5K2 254 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 MICAL3Q7RTP6 2002 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 A8MU76 341 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 PLPP1O14494 284 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 WBP4O75554 376 aaKnown RBP8.22□□□□□ -1.09
LIG4-204ENST00000611712 NDUFS1P28331 727 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 UGT2B10P36537 528 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 NR4A2P43354 598 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 XCR1P46094 333 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 GCGRP47871 477 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 SLC30A6Q6NXT4 461 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 BCDIN3DQ7Z5W3 292 aaKnown RBP8.22□□□□□ -1.09
LIG4-204ENST00000611712 FGD2Q7Z6J4 655 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 PLPP6Q8IY26 295 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 UXS1Q8NBZ7 420 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 ATP6V1C2Q8NEY4 427 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 OR4K14Q8NGD5 310 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 WACQ9BTA9 647 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 FBXO8Q9NRD0 319 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 C1GALT1Q9NS00 363 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 PHF11Q9UIL8 331 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 ERVK-11Q9UQG0 969 aa8.22□□□□□ -1.09
LIG4-204ENST00000611712 A0A0G2JPF8 293 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 HNRNPCL3B7ZW38 293 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 WWP2O00308 870 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 BTN3A3O00478 584 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 PLD2O14939 933 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 SSNA1O43805 119 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 PRAMEF4O60810 478 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 HNRNPCL4P0DMR1 293 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 CERS1P27544 350 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 MC3RP41968 323 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 WNT4P56705 351 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 FXNQ16595 210 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 TCTN1Q2MV58 587 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 PRAMEF9Q5VWM5 478 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 RTL4Q6ZR62 310 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 TECPR1Q7Z6L1 1165 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 ADGRD2Q7Z7M1 963 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 C7orf61Q8IZ16 206 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 ACOT4Q8N9L9 421 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.21□□□□□ -1.09
LIG4-204ENST00000611712 ANKK1Q8NFD2 765 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 OR2T33Q8NG76 320 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 TM4SF18Q96CE8 201 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 NEURL3Q96EH8 262 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 SIPA1Q96FS4 1042 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 C7orf34Q96L11 122 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 ZSWIM3Q96MP5 696 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 PITX2Q99697 317 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 AKIP1Q9NQ31 210 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 TAAR2Q9P1P5 351 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 ING4Q9UNL4 249 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 MRPS33Q9Y291 106 aaKnown RBP8.21□□□□□ -1.09
LIG4-204ENST00000611712 PPIL1Q9Y3C6 166 aa8.21□□□□□ -1.09
LIG4-204ENST00000611712 PCDHGB1Q9Y5G3 927 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms