RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 GLI4P10075 376 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 DRD2P14416 443 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 KRT15P19012 456 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 ENDOUP21128 410 aaKnown RBP14.5□□□□□ -0.09
VRK3-221ENST00000600284 GPX3P22352 226 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 FEN1P39748 380 aaKnown RBP14.5□□□□□ -0.09
VRK3-221ENST00000600284 ZFP36L2P47974 494 aaKnown RBP14.5□□□□□ -0.09
VRK3-221ENST00000600284 PKNOX1P55347 436 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 FBXW4P57775 412 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 NAA20P61599 178 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 DCAF7P61962 342 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 MGAT2Q10469 447 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 C1orf185Q5T7R7 199 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 TMEM81Q6P7N7 255 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 TMEM64Q6YI46 380 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 PACS2Q86VP3 889 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 CCDC71Q8IV32 467 aaPredicted RBP14.5□□□□□ -0.09
VRK3-221ENST00000600284 SAMD14Q8IZD0 417 aaPredicted RBP14.5□□□□□ -0.09
VRK3-221ENST00000600284 LIX1Q8N485 282 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 EIF1ADQ8N9N8 165 aaKnown RBP14.5□□□□□ -0.09
VRK3-221ENST00000600284 OR10Q1Q8NGQ4 319 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 NTNG2Q96CW9 530 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 CCDC126Q96EE4 140 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 JSRP1Q96MG2 331 aaPredicted RBP14.5□□□□□ -0.09
VRK3-221ENST00000600284 ZNF681Q96N22 645 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 BRINP2Q9C0B6 783 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 SLC24A3Q9HC58 644 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 MAT2BQ9NZL9 334 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 FBN2P35556 2912 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 ADGRG4Q8IZF6 3080 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 ABCB1P08183 1280 aaPredicted RBP14.49□□□□□ -0.09
VRK3-221ENST00000600284 FAM153BP0C7A2 387 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 RHOXF2BP0C7M4 288 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 GDF1P27539 372 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 ABCD3P28288 659 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 MSX1P28360 303 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 HMOX2P30519 316 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 CASP3P42574 277 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 GSTM5P46439 218 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 LCP2Q13094 533 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 FAM153CQ494X1 144 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 SPIN4Q56A73 249 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 FAM111BQ6SJ93 734 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 NUP54Q7Z3B4 507 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 MZB1Q8WU39 189 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 KLHL29Q96CT2 875 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 ERP27Q96DN0 273 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 TMEM41AQ96HV5 264 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 LCORQ96JN0 433 aaPredicted RBP14.49□□□□□ -0.09
VRK3-221ENST00000600284 RILPQ96NA2 401 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 RHOXF2Q9BQY4 288 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 SHCBP1LQ9BZQ2 653 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 UCK2Q9BZX2 261 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 NXF5Q9H1B4 397 aaKnown RBP14.49□□□□□ -0.09
VRK3-221ENST00000600284 MCCC2Q9HCC0 563 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 SIRT5Q9NXA8 310 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 SPRR3Q9UBC9 169 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 TNFRSF10DQ9UBN6 386 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 PRODH2Q9UF12 536 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 BCAP29Q9UHQ4 241 aa14.49□□□□□ -0.09
VRK3-221ENST00000600284 NKX2-6A6NCS4 301 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 FAM90A27PA6NNH2 459 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 AHRRA9YTQ3 701 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 H3BQF6 201 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 PPM1BO75688 479 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 ESRRBO95718 433 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 HPNP05981 417 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 PYGBP11216 843 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 DRD5P21918 477 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 SOX18P35713 384 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 PPICP45877 212 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 ALDH9A1P49189 494 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 SNTA1Q13424 505 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 HEPACAMQ14CZ8 416 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 SF3B4Q15427 424 aaKnown RBP eCLIP14.48□□□□□ -0.09
VRK3-221ENST00000600284 TCHHL1Q5QJ38 904 aaPredicted RBP14.48□□□□□ -0.09
VRK3-221ENST00000600284 RIPPLY2Q5TAB7 128 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 GALNT18Q6P9A2 607 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 DMRTC2Q8IXT2 367 aaPredicted RBP14.48□□□□□ -0.09
VRK3-221ENST00000600284 MMP21Q8N119 569 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 ZNF675Q8TD23 568 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 CNRIP1Q96F85 164 aaPredicted RBP14.48□□□□□ -0.09
VRK3-221ENST00000600284 HBEGFQ99075 208 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 ACPTQ9BZG2 426 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 SLC6A15Q9H2J7 730 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 EPB41L4BQ9H329 900 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 UBQLN3Q9H347 655 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 PPCSQ9HAB8 311 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 NPDC1Q9NQX5 325 aaPredicted RBP14.48□□□□□ -0.09
VRK3-221ENST00000600284 ALKBH4Q9NXW9 302 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 UTS2RQ9UKP6 389 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 DTX4Q9Y2E6 619 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 DLGAP4Q9Y2H0 992 aa14.48□□□□□ -0.09
VRK3-221ENST00000600284 NINQ8N4C6 2090 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 A0A0G2JNJ9 132 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 GOLGA8RI6L899 631 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 TO15178 435 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 PCDH7O60245 1069 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 LRATO95237 230 aa14.47□□□□□ -0.09
VRK3-221ENST00000600284 CBX7O95931 251 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms