RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 RPRMLQ8N4K4 120 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 PAQR8Q8TEZ7 354 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 CHTF18Q8WVB6 975 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 PPWD1Q96BP3 646 aaKnown RBP16.51■□□□□ 0.23
HOMER3-208ENST00000595756 ZBTB9Q96C00 473 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 MECRQ9BV79 373 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 CNPPD1Q9BV87 410 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 TUBA8Q9NY65 449 aaPredicted RBP16.51■□□□□ 0.23
HOMER3-208ENST00000595756 EXPH5Q8NEV8 1989 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 A0A1B0GTL3 188 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 OR6C76A6NM76 312 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 NPIPA2E9PIF3 369 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 NPIPA3F8WFD2 350 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 MANBAO00462 879 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 SUSD5O60279 629 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 OR10H2O60403 315 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 GPR75O95800 540 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 AIFM1O95831 613 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 CHEK2O96017 543 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 FBXO45P0C2W1 286 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 FAM58BPP0C7Q3 252 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 UROSP10746 265 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 ERVK-8P63133 956 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 TFF3Q07654 80 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 CSTF3Q12996 717 aaKnown RBP16.5■□□□□ 0.23
HOMER3-208ENST00000595756 EBPQ15125 230 aaKnown RBP16.5■□□□□ 0.23
HOMER3-208ENST00000595756 OR52E8Q6IFG1 317 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 RNF111Q6ZNA4 994 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 FBXW8Q8N3Y1 598 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 ANKRD42Q8N9B4 389 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 OR5M3Q8NGP4 307 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 LILRB4Q8NHJ6 448 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 ARL8AQ96BM9 186 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 WWTR1Q9GZV5 400 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 ZNF703Q9H7S9 590 aaPredicted RBP16.5■□□□□ 0.23
HOMER3-208ENST00000595756 WDR41Q9HAD4 459 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 PNPLA3Q9NST1 481 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 ERVK-19Q9WJR5 959 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 NCKAP5O14513 1909 aa16.5■□□□□ 0.23
HOMER3-208ENST00000595756 A0A1W2PR48 441 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 TMEM114B3SHH9 223 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 UBFD1O14562 309 aaKnown RBP16.49■□□□□ 0.23
HOMER3-208ENST00000595756 HCN1O60741 890 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 PDYNP01213 254 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 SERPINE1P05121 402 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 FGF4P08620 206 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 CAPN3P20807 821 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 ACVR2AP27037 513 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 MSX1P28360 303 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 SLC37A1P57057 533 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 NUP107P57740 925 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 MPP2Q14168 576 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 GXYLT1Q4G148 440 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 SGO1Q5FBB7 561 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 SLC22A10Q63ZE4 541 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 PAGE2Q7Z2X7 111 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 TRIM42Q8IWZ5 723 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 INTS1Q8N201 2190 aaKnown RBP16.49■□□□□ 0.23
HOMER3-208ENST00000595756 OR6Y1Q8NGX8 325 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 RIT1Q92963 219 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 GAL3ST4Q96RP7 486 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 PAIP2Q9BPZ3 127 aaKnown RBP16.49■□□□□ 0.23
HOMER3-208ENST00000595756 VPS29Q9UBQ0 182 aa16.49■□□□□ 0.23
HOMER3-208ENST00000595756 BOKQ9UMX3 212 aaPredicted RBP16.49■□□□□ 0.23
HOMER3-208ENST00000595756 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.49■□□□□ 0.23
HOMER3-208ENST00000595756 ARHGAP21Q5T5U3 1957 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 FAM90A27PA6NNH2 459 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 AZIN1O14977 448 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 ATP8B1O43520 1251 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 WDR1O75083 606 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 CLPSP04118 112 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 CELA3AP09093 270 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 SLC35E2P0CK97 266 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 PIGAP37287 484 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 MAN2A2P49641 1150 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 TLE4Q04727 773 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 ZNF267Q14586 743 aaPredicted RBP16.48■□□□□ 0.23
HOMER3-208ENST00000595756 CHI3L2Q15782 390 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 ARL13AQ5H913 290 aaPredicted RBP16.48■□□□□ 0.23
HOMER3-208ENST00000595756 B3GNT6Q6ZMB0 384 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 RNF165Q6ZSG1 346 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 CLYBLQ8N0X4 340 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 SARAFQ96BY9 339 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 MCCC2Q9HCC0 563 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 PFDN4Q9NQP4 134 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 NPDC1Q9NQX5 325 aaPredicted RBP16.48■□□□□ 0.23
HOMER3-208ENST00000595756 QPCTLQ9NXS2 382 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 CNIH4Q9P003 139 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 ADAM29Q9UKF5 820 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 SLC12A4Q9UP95 1085 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 TIMM22Q9Y584 194 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 FAM215AQ9Y5M1 114 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 CHCHD2Q9Y6H1 151 aaPredicted RBP16.48■□□□□ 0.23
HOMER3-208ENST00000595756 F8P00451 2351 aa16.48■□□□□ 0.23
HOMER3-208ENST00000595756 ATP6AP2A0A1C7CYW4 349 aa16.47■□□□□ 0.23
HOMER3-208ENST00000595756 WDR91A4D1P6 747 aa16.47■□□□□ 0.23
HOMER3-208ENST00000595756 NKX2-6A6NCS4 301 aa16.47■□□□□ 0.23
HOMER3-208ENST00000595756 LRRC3CA6NJW4 275 aa16.47■□□□□ 0.23
HOMER3-208ENST00000595756 GLOD5A6NK44 160 aa16.47■□□□□ 0.23
HOMER3-208ENST00000595756 ATP6AP2O75787 350 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms