RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SLCO4C1Q6ZQN7 724 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 SLC46A3Q7Z3Q1 461 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 CCDC103Q8IW40 242 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 CADM3Q8N126 398 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 DEPDC4Q8N2C3 294 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 SLC5A8Q8N695 610 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 OR52N2Q8NGI0 321 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.82□□□□□ -0.24e-15■■■□□ 18.8
CCDC43-203ENST00000588210 PROX1Q92786 737 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 CCDC74AQ96AQ1 378 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 WDR34Q96EX3 536 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 TMEM38AQ9H6F2 299 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 SH3BP4Q9P0V3 963 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 SCHIP1Q9P0W5 487 aaPredicted RBP13.82□□□□□ -0.2
CCDC43-203ENST00000588210 WDR37Q9Y2I8 494 aa13.82□□□□□ -0.2
CCDC43-203ENST00000588210 ISPDA4D126 451 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 RHPN2P1A8MT19 583 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 TAF4O00268 1085 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 PPM1DO15297 605 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 ZW10O43264 779 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 CNOT3O75175 753 aaKnown RBP13.81□□□□□ -0.2
CCDC43-203ENST00000588210 ETFAP13804 333 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 C21orf33P30042 268 aaPredicted RBP13.81□□□□□ -0.2
CCDC43-203ENST00000588210 CRATP43155 626 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 SPIBQ01892 262 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 HHEXQ03014 270 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 PDE7AQ13946 482 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 SYT16Q17RD7 645 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 MICAQ29983 383 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 COX20Q5RI15 118 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.81□□□□□ -0.2
CCDC43-203ENST00000588210 USP43Q70EL4 1123 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 ZNF438Q7Z4V0 828 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 TMPRSS11BQ86T26 416 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 LGI4Q8N135 537 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 GGHQ92820 318 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 CCDC3Q9BQI4 270 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 NXF2Q9GZY0 626 aaKnown RBP13.81□□□□□ -0.2
CCDC43-203ENST00000588210 ABCG4Q9H172 646 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 ZBTB20Q9HC78 741 aaPredicted RBP13.81□□□□□ -0.2
CCDC43-203ENST00000588210 CPNE7Q9UBL6 633 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 KCNE2Q9Y6J6 123 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 SH3BGRLO75368 114 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 OPN1SWP03999 348 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 ITGA2P17301 1181 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 GADD45AP24522 165 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 RPL3P39023 403 aaKnown RBP13.81□□□□□ -0.2
CCDC43-203ENST00000588210 GPR3P46089 330 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 GSSP48637 474 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 HBA1P69905 142 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 CDC20Q12834 499 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 DNASE1L3Q13609 305 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 SCARB2Q14108 478 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 FBXO15Q8NCQ5 510 aaPredicted RBP13.81□□□□□ -0.2
CCDC43-203ENST00000588210 WDR48Q8TAF3 677 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 NEIL2Q969S2 332 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 FOPNLQ96NB1 174 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 SLC35A5Q9BS91 424 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 SP140LQ9H930 580 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 POT1Q9NUX5 634 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 ZNF226Q9NYT6 803 aa13.81□□□□□ -0.2
CCDC43-203ENST00000588210 CCDC59Q9P031 241 aaKnown RBP13.81□□□□□ -0.2
CCDC43-203ENST00000588210 ZNF624Q9P2J8 865 aaPredicted RBP13.81□□□□□ -0.2
CCDC43-203ENST00000588210 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.81□□□□□ -0.2
CCDC43-203ENST00000588210 SAGE2PA6NJ88 616 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 FOXE1O00358 373 aaPredicted RBP13.8□□□□□ -0.2
CCDC43-203ENST00000588210 UPK1BO75841 260 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 SLC35G4P0C7Q5 338 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 TNFRSF1BP20333 461 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 EIF2B2P49770 351 aaKnown RBP13.8□□□□□ -0.2
CCDC43-203ENST00000588210 CDH12P55289 794 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 UBE2IP63279 158 aaKnown RBP13.8□□□□□ -0.2
CCDC43-203ENST00000588210 EEF1A2Q05639 463 aaKnown RBP13.8□□□□□ -0.2
CCDC43-203ENST00000588210 CD300CQ08708 224 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 EXOC3L2Q2M3D2 409 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 DHRS13Q6UX07 377 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 ANGPTL8Q6UXH0 198 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 NCCRP1Q6ZVX7 275 aaPredicted RBP13.8□□□□□ -0.2
CCDC43-203ENST00000588210 SLC22A16Q86VW1 577 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 TRIM48Q8IWZ4 208 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 LAS2Q8IYD9 372 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 LILRA3Q8N6C8 439 aaPredicted RBP13.8□□□□□ -0.2
CCDC43-203ENST00000588210 KBTBD8Q8NFY9 601 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 ZNF675Q8TD23 568 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 COL21A1Q96P44 957 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.8□□□□□ -0.2
CCDC43-203ENST00000588210 RLIMQ9NVW2 624 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 CCDC88CQ9P219 2028 aa13.8□□□□□ -0.2
CCDC43-203ENST00000588210 PRAMEF25A6NGN4 478 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 AGAP5A6NIR3 686 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 OR52A4PA6NMU1 304 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 C6orf47O95873 294 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 RPLP0P05388 317 aaKnown RBP13.79□□□□□ -0.2
CCDC43-203ENST00000588210 FURINP09958 794 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 ADORA3P0DMS8 318 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 LIMS1P48059 325 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 TBPL1P62380 186 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 IRF3Q14653 427 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 RPE65Q16518 533 aa13.79□□□□□ -0.2
CCDC43-203ENST00000588210 ZNF181Q2M3W8 571 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms