RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 A8MXE2 369 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 SUPT3HB4E1H0 165 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 H0YIV9 168 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 H7C1Q1 480 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 SUPT3HO75486 399 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 PPM1BO75688 479 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 TNFSF13O75888 250 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 RCBTB2O95199 551 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 S100BP04271 92 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-225ENST00000586385 EPB42P16452 691 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 PTX3P26022 381 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-225ENST00000586385 PIK3CGP48736 1102 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 STARP49675 285 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 GFRA1P56159 465 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 CUL3Q13618 768 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 TOMM20Q15388 145 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 SF3B4Q15427 424 aaKnown RBP eCLIP10.8□□□□□ -0.682e-6■■■□□ 15.1
BRCA1-225ENST00000586385 FAM219BQ5XKK7 198 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 OR52E8Q6IFG1 317 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 TMEM81Q6P7N7 255 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 CENPLQ8N0S6 344 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-225ENST00000586385 C17orf47Q8NEP4 570 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 ISL2Q96A47 359 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 INTS12Q96CB8 462 aaKnown RBP10.8□□□□□ -0.68
BRCA1-225ENST00000586385 NXNL1Q96CM4 212 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 SFXN3Q9BWM7 321 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 OR2B2Q9GZK3 357 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 SERHLQ9NQF3 203 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 C6orf203Q9P0P8 240 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-225ENST00000586385 RNF11Q9Y3C5 154 aa10.8□□□□□ -0.68
BRCA1-225ENST00000586385 ZANQ9Y493 2812 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 EFCAB8A8MWE9 144 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 CAPN14A8MX76 684 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 ICOSLGO75144 302 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 UGT2B11O75310 529 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 ERN1O75460 977 aaKnown RBP10.79□□□□□ -0.68
BRCA1-225ENST00000586385 TGM6O95932 706 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 ACTL6AO96019 429 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 CYP4B1P13584 511 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 TCP1P17987 556 aaKnown RBP10.79□□□□□ -0.68
BRCA1-225ENST00000586385 CNTFP26441 200 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 LOXP28300 417 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-225ENST00000586385 PCSK6P29122 969 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 CCKARP32238 428 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 TMED10P49755 219 aaKnown RBP10.79□□□□□ -0.68
BRCA1-225ENST00000586385 LHX2P50458 406 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 IRF9Q00978 393 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 SRYQ05066 204 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 DUSP2Q05923 314 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 FAM27E3Q08E93 113 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 ILF2Q12905 390 aaKnown RBP10.79□□□□□ -0.68
BRCA1-225ENST00000586385 RCAN2Q14206 197 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 SETDB1Q15047 1291 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 CPSF6Q16630 551 aaKnown RBP eCLIP10.79□□□□□ -0.68
BRCA1-225ENST00000586385 LIPJQ5W064 366 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 FAM111BQ6SJ93 734 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 CYS1Q717R9 158 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 MYLK4Q86YV6 388 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-225ENST00000586385 TRIM42Q8IWZ5 723 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 L3MBTL4Q8NA19 623 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 OR1J4Q8NGS1 313 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 PPP1R14CQ8TAE6 165 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 PYROXD1Q8WU10 500 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 NUDT8Q8WV74 236 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 WNT2BQ93097 391 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 MARK4Q96L34 752 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 Q96MF0 132 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 WFIKKN1Q96NZ8 548 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 PIP5K1AQ99755 562 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 PIGQQ9BRB3 760 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 ITPAQ9BY32 194 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 PRM3Q9NNZ6 103 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 SAYSD1Q9NPB0 183 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 ZNF639Q9UID6 485 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 ADAM21Q9UKJ8 722 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 CES1P1Q9UKY3 287 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 MAPRE3Q9UPY8 281 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 PCDHGA11Q9Y5H2 935 aa10.79□□□□□ -0.68
BRCA1-225ENST00000586385 FBN1P35555 2871 aaKnown RBP10.79□□□□□ -0.68
BRCA1-225ENST00000586385 ARID1AO14497 2285 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 A0A1W2PNV4 684 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 HMX2A2RU54 273 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 TRIM64A6NGJ6 449 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 TRIM64BA6NI03 449 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 C17orf51A8MQB3 221 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 FOXE1O00358 373 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-225ENST00000586385 CTIFO43310 598 aaKnown RBP10.78□□□□□ -0.68
BRCA1-225ENST00000586385 HCRTR2O43614 444 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 CBX7O95931 251 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 LTA4HP09960 611 aaKnown RBP10.78□□□□□ -0.68
BRCA1-225ENST00000586385 CPMP14384 443 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 NAGAP17050 411 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 XKP51811 444 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 CLDN18P56856 261 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 NRG3P56975 720 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 EXOSC7Q15024 291 aaKnown RBP10.78□□□□□ -0.68
BRCA1-225ENST00000586385 PRICKLE4Q2TBC4 344 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 KBTBD12Q3ZCT8 623 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 HLA-DQA1Q5Y7H0 255 aa10.78□□□□□ -0.68
BRCA1-225ENST00000586385 SLC30A6Q6NXT4 461 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms