RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 GGACTQ9BVM4 153 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SARGQ9BW04 601 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 OR51B6Q9H340 312 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SPG21Q9NZD8 308 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 DNAJB9Q9UBS3 223 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ZMYM5Q9UJ78 669 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 KLK4Q9Y5K2 254 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 LCMT2O60294 686 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 DLX3O60479 287 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SLC35E2BP0CK96 405 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 RAP2AP10114 183 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 POU3F2P20265 443 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ITGA3P26006 1051 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NNMTP40261 264 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 PBX2P40425 430 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 RGS6P49758 472 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 VSX2P58304 361 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 RAB2AP61019 212 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 YBX1P67809 324 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ZNF155Q12901 538 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 GBX1Q14549 363 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ZNF460Q14592 562 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ZNF697Q5TEC3 545 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 KCTD11Q693B1 232 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 LIN54Q6MZP7 749 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 RPL13AP3Q6NVV1 102 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 FTMTQ8N4E7 242 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 GPR22Q99680 433 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 METTL1Q9UBP6 276 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 EIF2B4Q9UI10 523 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SCP2D1Q9UJQ7 156 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NDRG2Q9UN36 371 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 FIS1Q9Y3D6 152 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SDC3O75056 442 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ICOSLGO75144 302 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 PAMP19021 973 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ANXA7P20073 488 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 IGFBP5P24593 272 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 IRS1P35568 1242 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 MAGEA2P43356 314 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 FABP9Q0Z7S8 132 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SKP2Q13309 424 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 EIF4HQ15056 248 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 EML3Q32P44 896 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 TMEM95Q3KNT9 176 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 CDNFQ49AH0 187 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 MEDAGQ5VYS4 303 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 DHRS7BQ6IAN0 325 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ZC3H14Q6PJT7 736 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 FAM198BQ6UWH4 519 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 LRRTM4Q86VH4 590 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SLC34A3Q8N130 599 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 MOSPD2Q8NHP6 518 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SPPL3Q8TCT6 385 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 STYXQ8WUJ0 223 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 GATAD2BQ8WXI9 593 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 LRIG1Q96JA1 1093 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SEMA6CQ9H3T2 930 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 WDCPQ9H6R7 721 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ASCL3Q9NQ33 180 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 LATS2Q9NRM7 1088 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 FAM212BQ9NTI7 297 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SPASTQ9UBP0 616 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 POLR3HQ9Y535 204 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 PCDHA9Q9Y5H5 950 aa11.28□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SHROOM3Q8TF72 1996 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 TNRC18O15417 2968 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NLRC5Q86WI3 1866 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 MEX3AA1L020 520 aaKnown RBP11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NEMP2A6NFY4 417 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NR5A2O00482 541 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 PRRG1O14668 218 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 PSMD3O43242 534 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 CIDEAO60543 219 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 PRAMEF1O95521 474 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 S1PR4O95977 384 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 EGFP01133 1207 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SOD2P04179 222 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SBK2P0C263 348 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ZNF37AP17032 561 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SSTR4P31391 388 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 CHRNB3Q05901 458 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 FAM98BQ52LJ0 330 aaKnown RBP11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 PDZD4Q76G19 769 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SLC41A1Q8IVJ1 513 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 DCUN1D3Q8IWE4 304 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 PDZD9Q8IXQ8 264 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NPWQ8N729 165 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 TMEM145Q8NBT3 493 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 HUS1BQ8NHY5 278 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SCARB1Q8WTV0 552 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 TCTEX1D2Q8WW35 142 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SLAMF9Q96A28 289 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 DIRAS2Q96HU8 199 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 LRR1Q96L50 414 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NT5DC2Q9H857 520 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 GKN1Q9NS71 199 aa11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ING1Q9UK53 422 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP3-232ENST00000584168 MRTO4Q9UKD2 239 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms