RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 SMIM10Q96HG1 83 aa9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 CLPTM1LQ96KA5 538 aa9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 KLHL31Q9H511 634 aa9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 EFCAB1Q9HAE3 211 aa9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 KCNJ16Q9NPI9 418 aa9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 PRTFDC1Q9NRG1 225 aa9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 SDR39U1Q9NRG7 319 aaPredicted RBP9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 PNO1Q9NRX1 252 aaKnown RBP9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 PLSCR2Q9NRY7 297 aa9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 DNAJC11Q9NVH1 559 aa9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 AIG1Q9NVV5 245 aa9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 PPIEQ9UNP9 301 aaKnown RBP9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 YARS2Q9Y2Z4 477 aaKnown RBP9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 HRH3Q9Y5N1 445 aa9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 KCNE2Q9Y6J6 123 aa9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 C2CD3Q4AC94 2353 aa9.01□□□□□ -0.97
CDK5RAP3-227ENST00000583352 MED13LQ71F56 2210 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 SYNDIG1LA6NDD5 238 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 A8MVJ9 347 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 C4orf51C9J302 202 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 NPIPB8E9PQR5 432 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 ACOT7O00154 380 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 SLC28A1O00337 649 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 CLDN4O14493 209 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 AIM2O14862 343 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 ZFAND5O76080 213 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 PDE9AO76083 593 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 TOXO94900 526 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 ZNF10P21506 573 aaPredicted RBP9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 MSX1P28360 303 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 CASP2P42575 452 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 DIO3P55073 304 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 HSD17B7P56937 341 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 RAB38P57729 211 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 BTN3A2P78410 334 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 MXRA7P84157 204 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 PLGLB1Q02325 96 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 STX5Q13190 355 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 CUL3Q13618 768 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 GGTA1PQ4G0N0 100 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 GK5Q6ZS86 529 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 TMEM200AQ86VY9 491 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 ULK2Q8IYT8 1036 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 DEFB107AQ8IZN7 70 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 ARHGAP24Q8N264 748 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 MIER2Q8N344 545 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 FBXW8Q8N3Y1 598 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 SNX31Q8N9S9 440 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 PSD4Q8NDX1 1056 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 TTLQ8NG68 377 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 OR5M3Q8NGP4 307 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 CREB3L4Q8TEY5 395 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 TSPEARQ8WU66 669 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 WDR60Q8WVS4 1066 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 ASB15Q8WXK1 588 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 GAL3ST3Q96A11 431 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 MCUR1Q96AQ8 359 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 RCN3Q96D15 328 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 ZNF559Q9BR84 538 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 NPLQ9BXD5 320 aaPredicted RBP9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 UCK2Q9BZX2 261 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 BRINP2Q9C0B6 783 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 DEFB127Q9H1M4 99 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 SLC24A3Q9HC58 644 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 NPDC1Q9NQX5 325 aaPredicted RBP9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 HPF1Q9NWY4 346 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 KCMF1Q9P0J7 381 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 TNFRSF10DQ9UBN6 386 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 ZNF223Q9UK11 482 aaPredicted RBP9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 SLC22A14Q9Y267 594 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 MRPS33Q9Y291 106 aaKnown RBP9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 APCP25054 2843 aa9□□□□□ -0.97
CDK5RAP3-227ENST00000583352 FAM166BA8MTA8 275 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 NPIPA2E9PIF3 369 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 NPIPA3F8WFD2 350 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 LSM1O15116 133 aaKnown RBP8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 B3GALT2O43825 422 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 ULK1O75385 1050 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 IDO1P14902 403 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 HMOX2P30519 316 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 ZFP36L2P47974 494 aaKnown RBP8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 GPR143P51810 404 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 ART1P52961 327 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 NUP107P57740 925 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 PPIAP62937 165 aaKnown RBP8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 ERVK-8P63133 956 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 TFF3Q07654 80 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 PMPCAQ10713 525 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 SLC13A2Q13183 592 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 RUNX2Q13950 521 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 E2F2Q14209 437 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 KPNB1Q14974 876 aaKnown RBP8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 MAPRE2Q15555 327 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 SNCBQ16143 134 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 AP5B1Q2VPB7 878 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 PDCD4Q53EL6 469 aaKnown RBP8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 LIPJQ5W064 366 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 C8orf82Q6P1X6 216 aaPredicted RBP8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 BLOC1S3Q6QNY0 202 aa8.99□□□□□ -0.97
CDK5RAP3-227ENST00000583352 C16orf89Q6UX73 402 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms