RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	TUBB	P07437	444 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ANXA4	P09525	319 aa	Predicted RBP	11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	IFI6	P09912	130 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	CT62	P0C5K7	136 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	CHN1	P15882	459 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	DRD5	P21918	477 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	GPX3	P22352	226 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	PRPH2	P23942	346 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	PTGER4	P35408	488 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	FEN1	P39748	380 aa	Known RBP	11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	PPIC	P45877	212 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	DNASE1L1	P49184	302 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ALDH9A1	P49189	494 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	HTR6	P50406	440 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	VSNL1	P62760	191 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	HSF1	Q00613	529 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	IFFO1	Q0D2I5	559 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ZNF763	Q0D2J5	394 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	SNTA1	Q13424	505 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	IMPG1	Q17R60	797 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	TMEM198	Q66K66	360 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ACAD11	Q709F0	780 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	TRIL	Q7L0X0	811 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	NUP54	Q7Z3B4	507 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	FAM13C	Q8NE31	585 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	OR10G3	Q8NGC4	313 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	C16orf78	Q8WTQ4	265 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	CAVIN3	Q969G5	261 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	SARAF	Q96BY9	339 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	CNRIP1	Q96F85	164 aa	Predicted RBP	11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	APIP	Q96GX9	242 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	APOPT1	Q96IL0	206 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	LCOR	Q96JN0	433 aa	Predicted RBP	11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	DOHH	Q9BU89	302 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	TMEM109	Q9BVC6	243 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ANGPTL4	Q9BY76	406 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	BRINP2	Q9C0B6	783 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	DEFB127	Q9H1M4	99 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	SLC35C2	Q9NQQ7	365 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	TUBA8	Q9NY65	449 aa	Predicted RBP	11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	PLLP	Q9Y342	182 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	TIMM22	Q9Y584	194 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	APC	P25054	2843 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	DNAJC13	O75165	2243 aa		11.58	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708		A0A1W2PS29	197 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	SMIM23	A6NLE4	172 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	FAM166B	A8MTA8	275 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	FAM47E-STBD1	D6RA91	191 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	SLC28A1	O00337	649 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	PLOD3	O60568	738 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	TRIM13	O60858	407 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ABCB7	O75027	752 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	TRIM3	O75382	744 aa	Predicted RBP	11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	PPM1B	O75688	479 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	IL3	P08700	152 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	NEFH	P12036	1026 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	DDC	P20711	480 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ELAVL4	P26378	380 aa	Known RBP	11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	COL8A1	P27658	744 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ABCD3	P28288	659 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	HTR1E	P28566	365 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	SERPINB5	P36952	375 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	PIGA	P37287	484 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	MAGEA5	P43359	124 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	MAN2A2	P49641	1150 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	HMGCS1	Q01581	520 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	SPDYA	Q5MJ70	313 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	HIST2H2BC	Q6DN03	193 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	TRABD2A	Q86V40	505 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	CD163	Q86VB7	1156 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	TICAM1	Q8IUC6	712 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	MREG	Q8N565	214 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	BANP	Q8N9N5	519 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	SPPL2A	Q8TCT8	520 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	AEN	Q8WTP8	325 aa	Known RBP	11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ASB5	Q8WWX0	329 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	SREK1	Q8WXA9	508 aa	Known RBP	11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	DIO2	Q92813	273 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	NTNG2	Q96CW9	530 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	DTNBP1	Q96EV8	351 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ZNF764	Q96H86	408 aa	Predicted RBP	11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ZNF597	Q96LX8	424 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	KCNA7	Q96RP8	456 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	SMC6	Q96SB8	1091 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ZNF703	Q9H7S9	590 aa	Predicted RBP	11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	PROK2	Q9HC23	129 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	MYNN	Q9NPC7	610 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	SENP1	Q9P0U3	644 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	HEY2	Q9UBP5	337 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	BCAP29	Q9UHQ4	241 aa		11.57	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	EML6	Q6ZMW3	1958 aa		11.56	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	ABCA12	Q86UK0	2595 aa		11.56	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	TRGV5	A0A0B4J1U4	118 aa		11.56	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	TLDC2	A0PJX2	215 aa		11.56	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	FRG2C	A6NGY1	282 aa		11.56	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708		G3V3Y1	287 aa		11.56	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	RGS14	O43566	566 aa		11.56	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	NPHS1	O60500	1241 aa		11.56	□□□□□ -0.56
CDK5RAP3-222	ENST00000581708	WDR1	O75083	606 aa		11.56	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms