RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 CTHRC1Q96CG8 243 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 CRB3Q9BUF7 120 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 EBPLQ9BY08 206 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 NUF2Q9BZD4 464 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 BRINP2Q9C0B6 783 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 SEMA4CQ9C0C4 833 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ROGDIQ9GZN7 287 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ILKAPQ9H0C8 392 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF700Q9H0M5 742 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 WDR55Q9H6Y2 383 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 LRTM1Q9HBL6 345 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 EML4Q9HC35 981 aaKnown RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 AIG1Q9NVV5 245 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 C1orf109Q9NX04 203 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 LYARQ9NX58 379 aaKnown RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 P4HTMQ9NXG6 502 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 NKIRAS1Q9NYS0 192 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 C5AR2Q9P296 337 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 MARCOQ9UEW3 520 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 NDOR1Q9UHB4 597 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ATP6V1HQ9UI12 483 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF639Q9UID6 485 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 PHF11Q9UIL8 331 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 C3orf18Q9UK00 162 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 KCND3Q9UK17 655 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 FIS1Q9Y3D6 152 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 POLR3HQ9Y535 204 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 GPR45Q9Y5Y3 372 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 USH1CQ9Y6N9 552 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 SVILO95425 2214 aa3.53□□□□□ -1.84
SMARCE1-215ENST00000578995 MED12LQ86YW9 2145 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 DOCK7Q96N67 2140 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 GOLGA8QA0A0J9YX86 632 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ARHGAP10A1A4S6 786 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 C1orf226A1L170 272 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 BLACEA4D250 179 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 GOLGA8OA6NCC3 632 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 SAGE2PA6NJ88 616 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 GLOD5A6NK44 160 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF891A8MT65 544 aaPredicted RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 NOTOA8MTQ0 251 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 TCP11X1B4DZS4 312 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 C9J4A7 227 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 GOLGA8NF8WBI6 632 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 PCDH17O14917 1159 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 SCAMP2O15127 329 aaKnown RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 RGS14O43566 566 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 SHOX2O60902 331 aaPredicted RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 PEX11AO75192 247 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 CDC123O75794 336 aaPredicted RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 SEC24DO94855 1032 aaPredicted RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 TGDSO95455 350 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 NADKO95544 446 aaPredicted RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 GPR75O95800 540 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 HPP00738 406 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ATP1B1P05026 303 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ANXA4P09525 319 aaPredicted RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 IFI6P09912 130 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 C8orf89P0DMQ9 161 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ITGAMP11215 1152 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 G6PDP11413 515 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 CPMP14384 443 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 DDCP20711 480 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 DRD4P21917 467 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 GPX3P22352 226 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 CPN2P22792 545 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 EPHA3P29320 983 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 GALNSP34059 522 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 PTGER1P34995 402 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 FOLR3P41439 243 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 GSTM5P46439 218 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 STT3AP46977 705 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 RAP1GDS1P52306 607 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 MAPK12P53778 367 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 EMP2P54851 167 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 SLC26A5P58743 744 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 TAS2R50P59544 299 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 RPS15P62841 145 aaKnown RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ERVK-8P63133 956 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 PHEXP78562 749 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ID2Q02363 134 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 EEF1A2Q05639 463 aaKnown RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 TGM3Q08188 693 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ACSM2AQ08AH3 577 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 FUT7Q11130 342 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 CHAF1BQ13112 559 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 TERF2Q15554 542 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 LTB4RQ15722 352 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 TBR1Q16650 682 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ST3GAL2Q16842 350 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 PRICKLE4Q2TBC4 344 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 LSM12Q3MHD2 195 aaKnown RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 SFT2D3Q587I9 215 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF628Q5EBL2 1059 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 DCAF10Q5QP82 559 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 CCNYL2Q5T2Q4 361 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 IL23RQ5VWK5 629 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ATG16L1Q676U5 607 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ACSM2BQ68CK6 577 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms