RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 CDRT1O95170 752 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 PSMA1P25786 263 aaKnown RBP15.32■□□□□ 0.04
RAB40B-206ENST00000571995 VEZF1Q14119 521 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 ZNF404Q494X3 552 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 C22orf42Q6IC83 251 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 FAM131AQ6UXB0 335 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 CALHM3Q86XJ0 350 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 KBTBD8Q8NFY9 601 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 ACSL5Q9ULC5 683 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 NOTCH4Q99466 2003 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 KHNYNO15037 678 aaKnown RBP15.32■□□□□ 0.04
RAB40B-206ENST00000571995 B3GALT2O43825 422 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 UGDHO60701 494 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 CISD3P0C7P0 127 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 BCL6P41182 706 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 PRDX1Q06830 199 aaKnown RBP15.32■□□□□ 0.04
RAB40B-206ENST00000571995 MPEG1Q2M385 716 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 PDZK1Q5T2W1 519 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 ZNF57Q68EA5 555 aaPredicted RBP15.32■□□□□ 0.04
RAB40B-206ENST00000571995 SYNPOQ8N3V7 929 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 GLIPR2Q9H4G4 154 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 KCNE3Q9Y6H6 103 aa15.32■□□□□ 0.04
RAB40B-206ENST00000571995 GRXCR2A6NFK2 248 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 AGAP14A8MT82 685 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 SGK494L7N484 410 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 SNPHO15079 494 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 SEC14L2O76054 403 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 KRT8P05787 483 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 OPRD1P41143 372 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 RXRGP48443 463 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 PROX2Q3B8N5 592 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 PYDC2Q56P42 97 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 CDKL4Q5MAI5 379 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 GTF2IRD2BQ6EKJ0 949 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 FRMPD2BQ6IN97 320 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 FAM71E1Q6IPT2 247 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 Q6ZSR6 202 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 USP51Q70EK9 711 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 GTF2IRD2Q86UP8 949 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 LACC1Q8IV20 430 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 OR51G2Q8NGK0 314 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 IFT27Q9BW83 186 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 HDHD2Q9H0R4 259 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 MVB12BQ9H7P6 319 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 WBP1LQ9NX94 342 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 COL4A6Q14031 1691 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 CLCA1A8K7I4 914 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 ALOX5P09917 674 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 C5AR1P21730 350 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 PTPN6P29350 595 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 DEFA1P59665 94 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 DEFA3P59666 94 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 ZNF267Q14586 743 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-206ENST00000571995 ZNF791Q3KP31 576 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-206ENST00000571995 SPATC1Q76KD6 591 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 OR6T1Q8NGN1 323 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 MUL1Q969V5 352 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 DIRAS2Q96HU8 199 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 SLC38A2Q96QD8 506 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 HDHD5Q9BXW7 423 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 USP36Q9P275 1121 aaKnown RBP15.31■□□□□ 0.04
RAB40B-206ENST00000571995 DKK3Q9UBP4 350 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 SSR3Q9UNL2 185 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 CLCA3PQ9Y6N3 262 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 NBASA2RRP1 2371 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 PSMD9O00233 223 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 JRKO75564 520 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 FUCA1P04066 466 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 GYPBP06028 91 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 BMP4P12644 408 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 GABRA3P34903 492 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 CSNK1G2P78368 415 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 FADDQ13158 208 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 TMIEQ8NEW7 156 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 SMAP2Q8WU79 429 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-206ENST00000571995 OR1E3Q8WZA6 343 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 SLC38A3Q99624 504 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 SPATA5L1Q9BVQ7 753 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 PCBD2Q9H0N5 130 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 C6orf106Q9H6K1 298 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-206ENST00000571995 NEUROD4Q9HD90 331 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 GPATCH2Q9NW75 528 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 TMEM9Q9P0T7 183 aa15.31■□□□□ 0.04
RAB40B-206ENST00000571995 FAM171A2A8MVW0 826 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 CELP19835 753 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 HOXA9P31269 272 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 DCDC1P59894 354 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 PODNL1Q6PEZ8 512 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 TRIM69Q86WT6 500 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 LINC01555Q8NAE3 123 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 WDR12Q9GZL7 423 aaKnown RBP15.3■□□□□ 0.04
RAB40B-206ENST00000571995 OR52A5Q9H2C5 316 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 TRBV5-3A0A0A0MS03 114 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 TSC22D2O75157 780 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 REM1O75628 298 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 GRPRP30550 384 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 CSTF2P33240 577 aaKnown RBP eCLIP15.3■□□□□ 0.04
RAB40B-206ENST00000571995 GGT2P36268 569 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 SLC35A2P78381 396 aa15.3■□□□□ 0.04
RAB40B-206ENST00000571995 MAT1AQ00266 395 aaKnown RBP15.3■□□□□ 0.04
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