RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 TP53INP1Q96A56 240 aa21.83■■□□□ 1.09
RAB40C-212ENST00000569575 MS4A4EQ96PG1 132 aa21.83■■□□□ 1.09
RAB40C-212ENST00000569575 RAD21L1Q9H4I0 556 aa21.83■■□□□ 1.09
RAB40C-212ENST00000569575 ZNF160Q9HCG1 818 aa21.83■■□□□ 1.09
RAB40C-212ENST00000569575 CORO2BQ9UQ03 480 aa21.83■■□□□ 1.09
RAB40C-212ENST00000569575 NUP214P35658 2090 aaPredicted RBP21.83■■□□□ 1.08
RAB40C-212ENST00000569575 LOC100653049A0A140TA62 436 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 TAF4O00268 1085 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 KRT34O76011 436 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 PSMG1O95456 288 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 CT62P0C5K7 136 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 PRIM2P49643 509 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 CHAF1BQ13112 559 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 LTB4RQ15722 352 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 SPDYE7PQ495Y7 208 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 TRMT12Q53H54 448 aaKnown RBP21.82■■□□□ 1.08
RAB40C-212ENST00000569575 HACD2Q6Y1H2 254 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 ZNF621Q6ZSS3 439 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 ANKRD46Q86W74 232 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 KAT2AQ92830 837 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 NCLNQ969V3 563 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 FAM120BQ96EK7 910 aaKnown RBP21.82■■□□□ 1.08
RAB40C-212ENST00000569575 SH3GL1Q99961 368 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 CXorf36Q9H7Y0 433 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 TAGLN3Q9UI15 199 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 TEKT2Q9UIF3 430 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 SNX8Q9Y5X2 465 aa21.82■■□□□ 1.08
RAB40C-212ENST00000569575 MYOCOSA0A1B0GUC4 107 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 DUXAA6NLW8 204 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 CBX7O95931 251 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 CDK9P50750 372 aaKnown RBP21.81■■□□□ 1.08
RAB40C-212ENST00000569575 MRPS35P82673 323 aaKnown RBP21.81■■□□□ 1.08
RAB40C-212ENST00000569575 SRSF6Q13247 344 aaKnown RBP21.81■■□□□ 1.08
RAB40C-212ENST00000569575 TP53BP2Q13625 1128 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 H3F3CQ6NXT2 135 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 TREML1Q86YW5 311 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 NUP43Q8NFH3 380 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 DEFB126Q9BYW3 111 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 LHPPQ9H008 270 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 ZCCHC3Q9NUD5 404 aaKnown RBP21.81■■□□□ 1.08
RAB40C-212ENST00000569575 THUMPD1Q9NXG2 353 aaKnown RBP21.81■■□□□ 1.08
RAB40C-212ENST00000569575 NDE1Q9NXR1 346 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 BCAP29Q9UHQ4 241 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 AP3M1Q9Y2T2 418 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 PCDHGB3Q9Y5G1 929 aa21.81■■□□□ 1.08
RAB40C-212ENST00000569575 ASPDHA6ND91 283 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 AGR2O95994 175 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 ABCB1P08183 1280 aaPredicted RBP21.8■■□□□ 1.08
RAB40C-212ENST00000569575 PRKAR1AP10644 381 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 SOX18P35713 384 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 RNF4P78317 190 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 ZNHIT3Q15649 155 aaPredicted RBP21.8■■□□□ 1.08
RAB40C-212ENST00000569575 TRMT5Q32P41 509 aaKnown RBP21.8■■□□□ 1.08
RAB40C-212ENST00000569575 HLA-DQA1Q5Y7H0 255 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 SLC2A7Q6PXP3 512 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 SLC5A8Q8N695 610 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 CDRT4Q8N9R6 151 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 OR52R1Q8NGF1 315 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 MIPOL1Q8TD10 442 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 APOBEC4Q8WW27 367 aaKnown RBP21.8■■□□□ 1.08
RAB40C-212ENST00000569575 HOXB13Q92826 284 aaPredicted RBP21.8■■□□□ 1.08
RAB40C-212ENST00000569575 NEURL3Q96EH8 262 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 NUDT9Q9BW91 350 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 TRIM4Q9C037 500 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 PAIP1Q9H074 479 aaKnown RBP21.8■■□□□ 1.08
RAB40C-212ENST00000569575 ING2Q9H160 280 aa21.8■■□□□ 1.08
RAB40C-212ENST00000569575 HEMK1Q9Y5R4 338 aaPredicted RBP21.8■■□□□ 1.08
RAB40C-212ENST00000569575 C15orf38-AP3S2A0A0A6YYH1 394 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 CCT8L1PA6NM43 557 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 FBP2O00757 339 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 MRASO14807 208 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 ITGB2P05107 769 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 DRD5P21918 477 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 CALB2P22676 271 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 PTPN6P29350 595 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 SSTR4P31391 388 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 PPICP45877 212 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 EMDP50402 254 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 GABPB1Q06547 395 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-212ENST00000569575 NFYCQ13952 458 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 PAGE3Q5JUK9 113 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 SAXO2Q658L1 398 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 DLEU7Q6UYE1 221 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 ARPINQ7Z6K5 226 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 SLC15A4Q8N697 577 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 C16orf52Q8NHV5 167 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 NSL1Q96IY1 281 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 HOPXQ9BPY8 73 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-212ENST00000569575 SLC35A5Q9BS91 424 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 INPP5KQ9BT40 448 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 MAP10Q9P2G4 905 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 FAF1Q9UNN5 650 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-212ENST00000569575 ERVK-11Q9UQG0 969 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 PCDHB14Q9Y5E9 798 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 WDFY3Q8IZQ1 3526 aa21.79■■□□□ 1.08
RAB40C-212ENST00000569575 TRBV11-1A0A0K0K1C0 115 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 RNF103-CHMP3A0A140T963 221 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 C2orf92A0A1B0GVN3 265 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 EVPLLA8MZ36 301 aa21.78■■□□□ 1.08
RAB40C-212ENST00000569575 ACOX3O15254 700 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms