RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SENP5Q96HI0 755 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 CNDP1Q96KN2 507 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 RIT2Q99578 217 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 LITAFQ99732 161 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 LXNQ9BS40 222 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 ACPTQ9BZG2 426 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 CCSER1Q9C0I3 900 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 ZMYND12Q9H0C1 365 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 POLR3FQ9H1D9 316 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 DHX33Q9H6R0 707 aaKnown RBP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 Q9N2K0 584 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 DNAJC4Q9NNZ3 241 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 RBM28Q9NW13 759 aaKnown RBP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 SLCO1C1Q9NYB5 712 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 PTTG2Q9NZH5 202 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 TBC1D7Q9P0N9 293 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 GPR132Q9UNW8 380 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 KCNJ14Q9UNX9 436 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 SMC3Q9UQE7 1217 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 CCL26Q9Y258 94 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 PADI2Q9Y2J8 665 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 YIPF1Q9Y548 306 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 ATRXP46100 2492 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 PI4KAP42356 2102 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 ASCC3Q8N3C0 2202 aaKnown RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 PLXND1Q9Y4D7 1925 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 PLXNA2O75051 1894 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 A0A1B0GUA9 196 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 CFAP73A6NFT4 308 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 ZSCAN5CA6NGD5 496 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 SMIM1B2RUZ4 78 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 GPR89AB7ZAQ6 455 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 H0YCG3 227 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 TLR4O00206 839 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 ZNF197O14709 1029 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 CHADO15335 359 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 CIDEAO60543 219 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 PRAF2O60831 178 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 RHOBTB1O94844 696 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 SLITRK3O94933 977 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 BMP10O95393 424 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 TSHBP01222 138 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 APOHP02749 345 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 CSN3P07498 182 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 GPR89BP0CG08 455 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 SPP1P10451 314 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 SKILP12757 684 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 PRG2P13727 222 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 MSH3P20585 1137 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 CSRP1P21291 193 aaKnown RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 GABRR2P28476 465 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 NMT1P30419 496 aaKnown RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 ADSSP30520 456 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 AXLP30530 894 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 HOXA9P31269 272 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 SLC6A6P31641 620 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 ARL2P36404 184 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 MDH1P40925 334 aaKnown RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 LHX1P48742 406 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 RGS7P49802 495 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 SULT1E1P49888 294 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 ASCL1P50553 236 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 NR0B1P51843 470 aaKnown RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 MAPK12P53778 367 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 CLDN6P56747 220 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 PLD1Q13393 1074 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 PDE7AQ13946 482 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 TFDP1Q14186 410 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 DMC1Q14565 340 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 NR1D2Q14995 579 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 MAPK11Q15759 364 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 UPP1Q16831 310 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 ZC2HC1CQ53FD0 456 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 CEP85LQ5SZL2 805 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 CCDC183Q5T5S1 534 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 SDHAF4Q5VUM1 108 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 KCTD11Q693B1 232 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 IRGCQ6NXR0 463 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 PACS1Q6VY07 963 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 WDR88Q6ZMY6 472 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 TRPT1Q86TN4 253 aaKnown RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 RALGPS2Q86X27 583 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 C4orf19Q8IY42 314 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 APCDD1Q8J025 514 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 BATF2Q8N1L9 274 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 ELMOD1Q8N336 334 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 STPG4Q8N801 248 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 BANPQ8N9N5 519 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 FAM76AQ8TAV0 307 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 ZNF473Q8WTR7 871 aaKnown RBP3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 TCP11Q8WWU5 503 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 TM9SF4Q92544 642 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 MOB3AQ96BX8 217 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 SFXN2Q96NB2 322 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 DUX3Q96PT4 197 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 SLC22A12Q96S37 553 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 CYP2S1Q96SQ9 504 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 PSD2Q9BQI7 771 aa3.01□□□□□ -1.93
HMGB1P6-201ENST00000569046 ERP44Q9BS26 406 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms