RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 HRH3Q9Y5N1 445 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 NPFFR2Q9Y5X5 522 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 CHCHD2Q9Y6H1 151 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-209ENST00000567635 APCP25054 2843 aa6.37□□□□□ -1.39
SF3B3-209ENST00000567635 AKAP6Q13023 2319 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 GNG14A0A1W2PPG7 69 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 TLDC2A0PJX2 215 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 ANKRD33BA6NCL7 494 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 SMIM23A6NLE4 172 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 H3BQF6 201 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 UBFD1O14562 309 aaKnown RBP6.36□□□□□ -1.39
SF3B3-209ENST00000567635 COPEO14579 308 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 BCKDKO14874 412 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 PCDH7O60245 1069 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 PLIN3O60664 434 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 HCN1O60741 890 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 ERLIN1O75477 346 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 SNX4O95219 450 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 ABCB1P08183 1280 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-209ENST00000567635 RFPL3SP0C7P2 107 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 COX6B1P14854 86 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 NAGAP17050 411 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 KRT4P19013 534 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 MAGEA5P43359 124 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 GSTM5P46439 218 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 MAN2A2P49641 1150 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 TMED10P49755 219 aaKnown RBP6.36□□□□□ -1.39
SF3B3-209ENST00000567635 NAGLUP54802 743 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 VSNL1P62760 191 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 KCNJ2P63252 427 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 RPP38P78345 283 aaKnown RBP6.36□□□□□ -1.39
SF3B3-209ENST00000567635 RAE1P78406 368 aaKnown RBP6.36□□□□□ -1.39
SF3B3-209ENST00000567635 PMPCAQ10713 525 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 PRICKLE4Q2TBC4 344 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 EMC4Q5J8M3 183 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 SPDYAQ5MJ70 313 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 TBCELQ5QJ74 424 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 PRAMEF20Q5VT98 475 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 FAM219BQ5XKK7 198 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 TMEM198Q66K66 360 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 GALNT18Q6P9A2 607 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 SCIMPQ6UWF3 145 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 NCCRP1Q6ZVX7 275 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-209ENST00000567635 ACAD11Q709F0 780 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 TRILQ7L0X0 811 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 PACS2Q86VP3 889 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 CCDC116Q8IYX3 515 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 SAMD14Q8IZD0 417 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-209ENST00000567635 MMP21Q8N119 569 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 LRRC25Q8N386 305 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-209ENST00000567635 VWA5B2Q8N398 1253 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 FBXW8Q8N3Y1 598 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 CCDC63Q8NA47 563 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 C17orf47Q8NEP4 570 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 ADCY4Q8NFM4 1077 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 OR10G3Q8NGC4 313 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 RDH11Q8TC12 318 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 C16orf78Q8WTQ4 265 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 CA5BP1Q8WTZ4 195 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 RND1Q92730 232 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 ZDHHC16Q969W1 377 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 CTHRC1Q96CG8 243 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 KLHL29Q96CT2 875 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 JSRP1Q96MG2 331 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF681Q96N22 645 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 BRINP2Q9C0B6 783 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 EXO5Q9H790 373 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 PROK2Q9HC23 129 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 ZFP64Q9NPA5 681 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 ACKR4Q9NPB9 350 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 OXSMQ9NWU1 459 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 SIRT5Q9NXA8 310 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 QPCTLQ9NXS2 382 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 COQ3Q9NZJ6 369 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 MAT2BQ9NZL9 334 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 HEY2Q9UBP5 337 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 BCAP29Q9UHQ4 241 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 ZNF639Q9UID6 485 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 UTS2RQ9UKP6 389 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 ACAD8Q9UKU7 415 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 CNOT11Q9UKZ1 510 aaKnown RBP6.36□□□□□ -1.39
SF3B3-209ENST00000567635 CFL2Q9Y281 166 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 MYO9AB2RTY4 2548 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 ABCA4P78363 2273 aa6.36□□□□□ -1.39
SF3B3-209ENST00000567635 LRBAP50851 2863 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 TRGV5A0A0B4J1U4 118 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 AQP7O14520 342 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 ACOX3O15254 700 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 CDH16O75309 829 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 TRIM3O75382 744 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 CRCPO75575 148 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 BCAS2O75934 225 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 LRATO95237 230 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 IL3P08700 152 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 HOXD4P09016 255 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 CELA3AP09093 270 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 ANXA4P09525 319 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-209ENST00000567635 PCSK2P16519 638 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 DRD5P21918 477 aa6.35□□□□□ -1.39
SF3B3-209ENST00000567635 GPX3P22352 226 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms