RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 BHLHB9Q6PI77 547 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 ZNF367Q7RTV3 350 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 SLC46A3Q7Z3Q1 461 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 IQCHQ86VS3 1027 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 KRT73Q86Y46 540 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 TMEFF1Q8IYR6 380 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 TBC1D19Q8N5T2 526 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 AMER2Q8N7J2 671 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 FAM46DQ8NEK8 389 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 KBTBD8Q8NFY9 601 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 DHRS1Q96LJ7 313 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 CDCA4Q9BXL8 241 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 SLIRPQ9GZT3 109 aaKnown RBP13.54□□□□□ -0.24
SPG7-203ENST00000561702 RACGAP1Q9H0H5 632 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 NMNAT1Q9HAN9 279 aaPredicted RBP13.54□□□□□ -0.24
SPG7-203ENST00000561702 DNAAF2Q9NVR5 837 aaKnown RBP13.54□□□□□ -0.24
SPG7-203ENST00000561702 OR6C2Q9NZP2 312 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 FTSJ1Q9UET6 329 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 APOBEC3BQ9UH17 382 aaKnown RBP13.54□□□□□ -0.24
SPG7-203ENST00000561702 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.54□□□□□ -0.24
SPG7-203ENST00000561702 KLK4Q9Y5K2 254 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 DSPPQ9NZW4 1301 aa13.54□□□□□ -0.24
SPG7-203ENST00000561702 SPAG17Q6Q759 2223 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 BTN3A3O00478 584 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 CD40LGP29965 261 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 C21orf33P30042 268 aaPredicted RBP13.53□□□□□ -0.24
SPG7-203ENST00000561702 KCNJ5P48544 419 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 CCT3P49368 545 aaKnown RBP13.53□□□□□ -0.24
SPG7-203ENST00000561702 LSM3P62310 102 aaKnown RBP13.53□□□□□ -0.24
SPG7-203ENST00000561702 UBE2IP63279 158 aaKnown RBP13.53□□□□□ -0.24
SPG7-203ENST00000561702 CYP4F2P78329 520 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 ST3GAL4Q11206 333 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 ILKQ13418 452 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 IRF3Q14653 427 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 PUM1Q14671 1186 aaKnown RBP eCLIP13.53□□□□□ -0.24
SPG7-203ENST00000561702 INAQ16352 499 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 DCST1Q5T197 706 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 TSSK4Q6SA08 328 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 MAMSTRQ6ZN01 415 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 Q6ZPB1 254 aaPredicted RBP13.53□□□□□ -0.24
SPG7-203ENST00000561702 ZBTB46Q86UZ6 589 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 FBXL6Q8N531 539 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 OR2L3Q8NG85 312 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 NECAB3Q96P71 396 aaPredicted RBP13.53□□□□□ -0.24
SPG7-203ENST00000561702 TWSG1Q9GZX9 223 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 DCSTAMPQ9H295 470 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 MRPS30Q9NP92 439 aaKnown RBP13.53□□□□□ -0.24
SPG7-203ENST00000561702 SLAMF7Q9NQ25 335 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 SIRT3Q9NTG7 399 aaPredicted RBP13.53□□□□□ -0.24
SPG7-203ENST00000561702 NDOR1Q9UHB4 597 aa13.53□□□□□ -0.24
SPG7-203ENST00000561702 FUOMA2VDF0 154 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 M0R082 166 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 TLR4O00206 839 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 RTCAO00442 366 aaKnown RBP13.52□□□□□ -0.24
SPG7-203ENST00000561702 HMGN4O00479 90 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 GASTP01350 101 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 CSF2P04141 144 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 OSMP13725 252 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 LIPAP38571 399 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 BCAP31P51572 246 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 ABATP80404 500 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 HSPB3Q12988 150 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 ATP1A4Q13733 1029 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 GPR18Q14330 331 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 GANABQ14697 944 aaKnown RBP13.52□□□□□ -0.24
SPG7-203ENST00000561702 OXA1LQ15070 435 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 TNFAIP8L2Q6P589 184 aaPredicted RBP13.52□□□□□ -0.24
SPG7-203ENST00000561702 KLHL17Q6TDP4 642 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 TMEM64Q6YI46 380 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 PTCHD4Q6ZW05 846 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 TRIM48Q8IWZ4 208 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 MMP21Q8N119 569 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 MCFD2Q8NI22 146 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 SLC37A2Q8TED4 501 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 GTPBP3Q969Y2 492 aaKnown RBP13.52□□□□□ -0.24
SPG7-203ENST00000561702 MOAP1Q96BY2 351 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 UCK2Q9BZX2 261 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 SRMSQ9H3Y6 488 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 LHX9Q9NQ69 397 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 MS4A12Q9NXJ0 267 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 CPNE7Q9UBL6 633 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 ACAD8Q9UKU7 415 aa13.52□□□□□ -0.24
SPG7-203ENST00000561702 COL6A3P12111 3177 aa13.52□□□□□ -0.25
SPG7-203ENST00000561702 A0A0A6YYD5 115 aa13.52□□□□□ -0.25
SPG7-203ENST00000561702 ISM1B1AKI9 464 aa13.52□□□□□ -0.25
SPG7-203ENST00000561702 TAF4O00268 1085 aa13.52□□□□□ -0.25
SPG7-203ENST00000561702 LCMT2O60294 686 aaKnown RBP13.52□□□□□ -0.25
SPG7-203ENST00000561702 RECKO95980 971 aa13.52□□□□□ -0.25
SPG7-203ENST00000561702 H1F0P07305 194 aaKnown RBP13.52□□□□□ -0.25
SPG7-203ENST00000561702 ADORA3P0DMS8 318 aa13.52□□□□□ -0.25
SPG7-203ENST00000561702 NME1P15531 152 aaKnown RBP13.52□□□□□ -0.25
SPG7-203ENST00000561702 CHMP24386 653 aa13.52□□□□□ -0.25
SPG7-203ENST00000561702 NTSP30990 170 aa13.52□□□□□ -0.25
SPG7-203ENST00000561702 TSFMP43897 325 aaKnown RBP13.52□□□□□ -0.25
SPG7-203ENST00000561702 GSSP48637 474 aa13.52□□□□□ -0.25
SPG7-203ENST00000561702 PPP5CP53041 499 aa13.52□□□□□ -0.25
SPG7-203ENST00000561702 SNRPGP62308 76 aaKnown RBP13.52□□□□□ -0.25
SPG7-203ENST00000561702 SIGLEC14Q08ET2 396 aa13.52□□□□□ -0.25
SPG7-203ENST00000561702 ZNF404Q494X3 552 aa13.52□□□□□ -0.25
SPG7-203ENST00000561702 MEDAGQ5VYS4 303 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms