RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 PRDX6P30041 224 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 FEN1P39748 380 aaKnown RBP12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 CYB561P49447 251 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 SSR4P51571 173 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 SLC37A1P57057 533 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 DCAF7P61962 342 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 ZNF169Q14929 603 aaPredicted RBP12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 MLC1Q15049 377 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 DPY19L1Q2PZI1 675 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 SLC6A19Q695T7 634 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 OPN5Q6U736 354 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 ACAD11Q709F0 780 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 SPATA19Q7Z5L4 167 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 CAMKMTQ7Z624 323 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 BEST3Q8N1M1 668 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 LIX1Q8N485 282 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 CDC26Q8NHZ8 85 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 SLC22A8Q8TCC7 542 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 ACTRT2Q8TDY3 377 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 EGLN2Q96KS0 407 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 BRINP2Q9C0B6 783 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 OR10A5Q9H207 317 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 RASSF4Q9H2L5 321 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 SLAMF7Q9NQ25 335 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 MAT2BQ9NZL9 334 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 ZNF639Q9UID6 485 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 TNRC6AQ8NDV7 1962 aaKnown RBP12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 E9PBE3 544 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 SCAMP2O15127 329 aaKnown RBP12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 PDPK1O15530 556 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 COQ9O75208 318 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 ITGA10O75578 1167 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 C1QL1O75973 258 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 SORBS2O94875 1100 aaKnown RBP12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 NCF2P19878 526 aaPredicted RBP12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 FRKP42685 505 aaPredicted RBP12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 HLCSP50747 726 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 CLNS1AP54105 237 aaKnown RBP12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 CLDN8P56748 225 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 KLF10Q13118 480 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 ZNF628Q5EBL2 1059 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 CCDC116Q8IYX3 515 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 MMP21Q8N119 569 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 TMEM156Q8N614 296 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 TMEM178AQ8NBL3 297 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 CEP70Q8NHQ1 597 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 FBXO27Q8NI29 283 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 UCN3Q969E3 161 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 RAB3IPQ96QF0 476 aaPredicted RBP12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 CADM1Q9BY67 442 aaKnown RBP12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 EXO1Q9UQ84 846 aaKnown RBP12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 ZFYVE26Q68DK2 2539 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 BSNQ9UPA5 3926 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 SPTA1P02549 2419 aa12.97□□□□□ -0.33
PKNOX1-209ENST00000560448 C2orf92A0A1B0GVN3 265 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 TTC36A6NLP5 189 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 B2RBV5 119 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 SLC22A2O15244 555 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 GSC2O15499 205 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 G6PDP11413 515 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 CD46P15529 392 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 ADSLP30566 484 aaPredicted RBP12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 TMED10P49755 219 aaKnown RBP12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 NCBP2P52298 156 aaKnown RBP eCLIP12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 NRG3P56975 720 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 RIPK1Q13546 671 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 TUBA3CQ13748 450 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 EBPQ15125 230 aaKnown RBP12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 HLA-DQA1Q5Y7H0 255 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 TUBA3EQ6PEY2 450 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 DGAT2L6Q6ZPD8 337 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 C9orf40Q8IXQ3 194 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 TAGAPQ8N103 731 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 ZNF615Q8N8J6 731 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 FAM98AQ8NCA5 519 aaKnown RBP12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 TMEM125Q96AQ2 219 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 SGCZQ96LD1 299 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 PPP1R36Q96LQ0 422 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 AMDHD1Q96NU7 426 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 NPAS2Q99743 824 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 BHLHE41Q9C0J9 482 aaPredicted RBP12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 WWTR1Q9GZV5 400 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 ZBTB20Q9HC78 741 aaPredicted RBP12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 NEUROD4Q9HD90 331 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 TAS2R9Q9NYW1 312 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 SH3BP4Q9P0V3 963 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 LRFN1Q9P244 771 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 CROCCQ5TZA2 2017 aa12.96□□□□□ -0.33
PKNOX1-209ENST00000560448 PIEZO2Q9H5I5 2752 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 TMEM200CA6NKL6 621 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 A8MVJ9 347 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 ACOX3O15254 700 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 SOX30O94993 753 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 CT62P0C5K7 136 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 IDO1P14902 403 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 S1PR1P21453 382 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 CPOXP36551 454 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 CPA2P48052 419 aa12.96□□□□□ -0.34
PKNOX1-209ENST00000560448 OC90Q02509 493 aaPredicted RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms