RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 PTCHD4Q6ZW05 846 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 ZNF554Q86TJ5 538 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 ASPGQ86U10 573 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 MFSD4AQ8N468 514 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 TMCO5AQ8N6Q1 288 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 NUP43Q8NFH3 380 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 ST13P5Q8NFI4 369 aaPredicted RBP7.62□□□□□ -1.19
SMAD3-212ENST00000559937 B3GNT7Q8NFL0 401 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 TOR1AIP2Q8NFQ8 470 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 OR8J1Q8NGP2 316 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 OR8K5Q8NH50 307 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 NDNFQ8TB73 568 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 KLHL6Q8WZ60 621 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 OR1E3Q8WZA6 343 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 TM4SF19Q96DZ7 209 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 CNRIP1Q96F85 164 aaPredicted RBP7.62□□□□□ -1.19
SMAD3-212ENST00000559937 SIPA1Q96FS4 1042 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 SMIM10Q96HG1 83 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 ZNF681Q96N22 645 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 TRNT1Q96Q11 434 aaKnown RBP7.62□□□□□ -1.19
SMAD3-212ENST00000559937 SERINC2Q96SA4 455 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 ARHGDIGQ99819 225 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 FNDC11Q9BVV2 318 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 POLDIP3Q9BY77 421 aaKnown RBP7.62□□□□□ -1.19
SMAD3-212ENST00000559937 SLIRPQ9GZT3 109 aaKnown RBP7.62□□□□□ -1.19
SMAD3-212ENST00000559937 POLR2J3Q9H1A7 115 aaKnown RBP7.62□□□□□ -1.19
SMAD3-212ENST00000559937 DCSTAMPQ9H295 470 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 SLC28A3Q9HAS3 691 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 PRDM8Q9NQV8 689 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 TRNAU1APQ9NX07 287 aaKnown RBP7.62□□□□□ -1.19
SMAD3-212ENST00000559937 MS4A12Q9NXJ0 267 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 SCHIP1Q9P0W5 487 aaPredicted RBP7.62□□□□□ -1.19
SMAD3-212ENST00000559937 ATG4BQ9Y4P1 393 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 SNX11Q9Y5W9 270 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 ZNF780BQ9Y6R6 833 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 BDP1A6H8Y1 2624 aa7.62□□□□□ -1.19
SMAD3-212ENST00000559937 ARHGEF17Q96PE2 2063 aaPredicted RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 BRWD1Q9NSI6 2320 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 IRGMA1A4Y4 181 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 A6NCN8 305 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 METTL15A6NJ78 407 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 LRRC72A6NJI9 287 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 DUXAA6NLW8 204 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 C10orf142B7Z368 130 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 J3QRK9 145 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 TAF4O00268 1085 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 PGRMC2O15173 223 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 SLC31A1O15431 190 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 MAN1A2O60476 641 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 SEMA7AO75326 666 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 NME6O75414 186 aaPredicted RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 ALPPP05187 535 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 HMGN2P05204 90 aaKnown RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 CHRM4P08173 479 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 SLC35G6P0C7Q6 338 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 OCM2P0CE71 109 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 OCMP0CE72 109 aaPredicted RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 ACADMP11310 421 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 ENDOUP21128 410 aaKnown RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 HNRNPA2B1P22626 353 aaKnown RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 NR4A1P22736 598 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 CERS1P27544 350 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 CD40LGP29965 261 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 C21orf33P30042 268 aaPredicted RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 PRKAR1BP31321 381 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 AKT2P31751 481 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 IFNA8P32881 189 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 IDUAP35475 653 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 IFNGR2P38484 337 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 BUD31P41223 144 aaPredicted RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 GSSP48637 474 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 MAN2A2P49641 1150 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 NUDT6P53370 316 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 NCS1P62166 190 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 RHAGQ02094 409 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 TNFRSF17Q02223 184 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 FUT5Q11128 374 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 LASP1Q14847 261 aaKnown RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 SUZ12Q15022 739 aaKnown RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 SEC23BQ15437 767 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 GPR19Q15760 415 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 ARMCX4Q5H9R4 360 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 ATAD3BQ5T9A4 648 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 MFSD4BQ5TF39 518 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 HEPHL1Q6MZM0 1159 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 NIPAL1Q6NVV3 410 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 FAM180BQ6P0A1 224 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 CASP12Q6UXS9 341 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 VN1R4Q7Z5H5 301 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 MRGPREQ86SM8 312 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 CENPSQ8N2Z9 138 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 FAM26EQ8N5C1 309 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 AMER2Q8N7J2 671 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 OR4D11Q8NGI4 311 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 OR5D16Q8NGK9 328 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 VANGL1Q8TAA9 524 aaPredicted RBP7.61□□□□□ -1.19
SMAD3-212ENST00000559937 FLVCR1-AS1Q8TAF5 88 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 GNPDA2Q8TDQ7 276 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 RSC1A1Q92681 617 aa7.61□□□□□ -1.19
SMAD3-212ENST00000559937 PMM1Q92871 262 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms