RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 WDSUB1Q8N9V3 476 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF417Q8TAU3 575 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ACSL6Q9UKU0 697 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 CYP8B1Q9UNU6 501 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 PIAS3Q9Y6X2 628 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 A0A0D9SEW6 157 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 M0R233 179 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ARNTLO00327 626 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 OR12D1P0DN82 309 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 BMP2P12643 396 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 BMP4P12644 408 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 CREB1P16220 341 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 GGT1P19440 569 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 GJA8P48165 433 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ZNF423Q2M1K9 1284 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 HNRNPA1L2Q32P51 320 aaKnown RBP10.22□□□□□ -0.77
ACTN1-216ENST00000556083 CLVS2Q5SYC1 327 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 FAM205BPQ63HN1 556 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 RAB12Q6IQ22 244 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 HMBOX1Q6NT76 420 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 KCTD20Q7Z5Y7 419 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 SIAH1Q8IUQ4 282 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 PLEKHO2Q8TD55 490 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ASB15Q8WXK1 588 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 CITED4Q96RK1 184 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 CDC6Q99741 560 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ARMC1Q9NVT9 282 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 EMC3Q9P0I2 261 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ABRACLQ9P1F3 81 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 ANKMY1Q9P2S6 941 aa10.22□□□□□ -0.77
ACTN1-216ENST00000556083 GMFGO60234 142 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 SRPX2O60687 465 aaPredicted RBP10.21□□□□□ -0.77
ACTN1-216ENST00000556083 OSMP13725 252 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 IFNGR1P15260 489 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 TYRP1P17643 537 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 ART1P52961 327 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 C6orf89Q6UWU4 347 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 TAS1R3Q7RTX0 852 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 PDZD3Q86UT5 571 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 UEVLDQ8IX04 471 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 SECISBP2Q96T21 854 aaKnown RBP10.21□□□□□ -0.77
ACTN1-216ENST00000556083 GPR62Q9BZJ7 368 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 SYT4Q9H2B2 425 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 NGBQ9NPG2 151 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 OBP2AQ9NY56 170 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 NXT1Q9UKK6 140 aaKnown RBP10.21□□□□□ -0.77
ACTN1-216ENST00000556083 PCDHA9Q9Y5H5 950 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 CER1O95813 267 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 POLR2HP52434 150 aaKnown RBP10.21□□□□□ -0.77
ACTN1-216ENST00000556083 MSS51Q4VC12 460 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 TMEM53Q6P2H8 277 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 KLHDC8AQ8IYD2 350 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 OR8H3Q8N146 312 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 OR51G2Q8NGK0 314 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 KLHL15Q96M94 604 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 GPR174Q9BXC1 333 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 CLEC4EQ9ULY5 219 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 NFS1Q9Y697 457 aa10.21□□□□□ -0.77
ACTN1-216ENST00000556083 KCPQ6ZWJ8 1503 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 DNAJC25-GNG10A0A024R161 153 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 OR6C70A6NIJ9 312 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 CLCA1A8K7I4 914 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 TNFSF4P23510 183 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 PCGF2P35227 344 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 HOXD13P35453 343 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 AHRP35869 848 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 MAP2K3P46734 347 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 KEAP1Q14145 624 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 MORN1Q5T089 497 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 TTLL10Q6ZVT0 673 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 TMEM173Q86WV6 379 aaPredicted RBP10.21□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF280BQ86YH2 543 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.21□□□□□ -0.78
ACTN1-216ENST00000556083 MFSD8Q8NHS3 518 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF296Q8WUU4 475 aaPredicted RBP10.21□□□□□ -0.78
ACTN1-216ENST00000556083 MGLLQ99685 303 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 NTMT1Q9BV86 223 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 GPN2Q9H9Y4 310 aaPredicted RBP10.21□□□□□ -0.78
ACTN1-216ENST00000556083 EXTL2Q9UBQ6 330 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 KCTD3Q9Y597 815 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 PMF1-BGLAPU3KQ54 211 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 D6RAR5 112 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 PSMD9O00233 223 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 ATE1O95260 518 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 GJB5O95377 273 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 CELP19835 753 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 HOXA9P31269 272 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 INHBCP55103 352 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 EIF2S3LQ2VIR3 472 aaKnown RBP10.21□□□□□ -0.78
ACTN1-216ENST00000556083 DEFB134Q4QY38 66 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 RNASE10Q5GAN6 216 aaKnown RBP10.21□□□□□ -0.78
ACTN1-216ENST00000556083 NIPAL3Q6P499 406 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 SUSD1Q6UWL2 747 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 LARP4Q71RC2 724 aaKnown RBP eCLIP10.21□□□□□ -0.78
ACTN1-216ENST00000556083 SERPINA11Q86U17 422 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 PHTF2Q8N3S3 785 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 KDM1BQ8NB78 822 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 OR5T2Q8NGG2 359 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 OR5L1Q8NGL2 311 aa10.21□□□□□ -0.78
ACTN1-216ENST00000556083 HUS1BQ8NHY5 278 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms