RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 C16orf78Q8WTQ4 265 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 EXOSC8Q96B26 276 aaKnown RBP16.93■□□□□ 0.3
NEDD1-208ENST00000555806 SDCCAG3Q96C92 435 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 ITPAQ9BY32 194 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 SHCBP1LQ9BZQ2 653 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 IQCGQ9H095 443 aaKnown RBP16.93■□□□□ 0.3
NEDD1-208ENST00000555806 ZFP64Q9NPA5 681 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 CHST11Q9NPF2 352 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 OXSMQ9NWU1 459 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 COQ3Q9NZJ6 369 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 DTX4Q9Y2E6 619 aa16.93■□□□□ 0.3
NEDD1-208ENST00000555806 CENPEQ02224 2701 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 ANXA4P09525 319 aaPredicted RBP16.92■□□□□ 0.3
NEDD1-208ENST00000555806 RPP38P78345 283 aaKnown RBP16.92■□□□□ 0.3
NEDD1-208ENST00000555806 SLC18A2Q05940 514 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 IFFO1Q0D2I5 559 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 HEPACAMQ14CZ8 416 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 TBCELQ5QJ74 424 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 LIPMQ5VYY2 423 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 TMEM211Q6ICI0 200 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 C17orf47Q8NEP4 570 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 OR52R1Q8NGF1 315 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 OR5M9Q8NGP3 310 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 ZNF597Q96LX8 424 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 ZNF681Q96N22 645 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 NXF5Q9H1B4 397 aaKnown RBP16.92■□□□□ 0.3
NEDD1-208ENST00000555806 RUBCNLQ9H714 662 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 ZNF703Q9H7S9 590 aaPredicted RBP16.92■□□□□ 0.3
NEDD1-208ENST00000555806 PROK2Q9HC23 129 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 B4GALT7Q9UBV7 327 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 PLLPQ9Y342 182 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 HRH3Q9Y5N1 445 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 PCNX1Q96RV3 2341 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 ZNF407Q9C0G0 2248 aa16.92■□□□□ 0.3
NEDD1-208ENST00000555806 TRGV5A0A0B4J1U4 118 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 SERTM1A2A2V5 107 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 OR14I1A6ND48 311 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 LRRC3CA6NJW4 275 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 AQP7O14520 342 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 BCKDKO14874 412 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 CBX7O95931 251 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 SNRPB2P08579 225 aaKnown RBP16.91■□□□□ 0.3
NEDD1-208ENST00000555806 RFPL3SP0C7P2 107 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 PCSK2P16519 638 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 ABCD3P28288 659 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 MRPS35P82673 323 aaKnown RBP16.91■□□□□ 0.3
NEDD1-208ENST00000555806 CDSNQ15517 529 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 GXYLT1Q4G148 440 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 TRMT12Q53H54 448 aaKnown RBP16.91■□□□□ 0.3
NEDD1-208ENST00000555806 TMEM198Q66K66 360 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 BICRALQ6AI39 1079 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 ZNF585AQ6P3V2 769 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 GALNT18Q6P9A2 607 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 C10orf107Q8IVU9 208 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 CCDC116Q8IYX3 515 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 SAMD14Q8IZD0 417 aaPredicted RBP16.91■□□□□ 0.3
NEDD1-208ENST00000555806 RIBC1Q8N443 379 aaPredicted RBP16.91■□□□□ 0.3
NEDD1-208ENST00000555806 SIMC1Q8NDZ2 872 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 SPPL2AQ8TCT8 520 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 CA5BP1Q8WTZ4 195 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 PNPLA3Q9NST1 481 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 TNFRSF10DQ9UBN6 386 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 PRODH2Q9UF12 536 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 ZNF639Q9UID6 485 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 ACAD8Q9UKU7 415 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 CRYBG3Q68DQ2 2970 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 CACNA1DQ01668 2161 aa16.91■□□□□ 0.3
NEDD1-208ENST00000555806 NOTCH2Q04721 2471 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 A0A1B0GVC2 190 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 FIGNL2A6NMB9 653 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 NUDT17P0C025 328 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 UROSP10746 265 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 GDF1P27539 372 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 GSTM5P46439 218 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 MASP1P48740 699 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 ZNF763Q0D2J5 394 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 PLCXD2Q0VAA5 305 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 DUSP8Q13202 625 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 EMC4Q5J8M3 183 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 LIX1Q8N485 282 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 RPRMLQ8N4K4 120 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 MARVELD2Q8N4S9 558 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 OR9A2Q8NGT5 310 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 ZNF675Q8TD23 568 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 SARAFQ96BY9 339 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 CTHRC1Q96CG8 243 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 APOPT1Q96IL0 206 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 LCORQ96JN0 433 aaPredicted RBP16.9■□□□□ 0.3
NEDD1-208ENST00000555806 RILPQ96NA2 401 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 SECISBP2Q96T21 854 aaKnown RBP16.9■□□□□ 0.3
NEDD1-208ENST00000555806 TNFRSF12AQ9NP84 129 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 RRAGDQ9NQL2 400 aaPredicted RBP16.9■□□□□ 0.3
NEDD1-208ENST00000555806 SLC35C2Q9NQQ7 365 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 SIRT5Q9NXA8 310 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 SENP1Q9P0U3 644 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 POLR3HQ9Y535 204 aaPredicted RBP16.9■□□□□ 0.3
NEDD1-208ENST00000555806 CELSR2Q9HCU4 2923 aa16.9■□□□□ 0.3
NEDD1-208ENST00000555806 ANKRD33BA6NCL7 494 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 SUSD5O60279 629 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 HCN1O60741 890 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms