RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ASB18Q6ZVZ8 466 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 PLCZ1Q86YW0 608 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF595Q8IYB9 648 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 PHACTR4Q8IZ21 702 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF786Q8N393 782 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 GALNT4Q8N4A0 578 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SPICQ8N5J4 248 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 MRPL43Q8N983 215 aaKnown RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 C17orf47Q8NEP4 570 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 OR2A1Q8NGT9 310 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 GNPDA2Q8TDQ7 276 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 PTX4Q96A99 478 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 CREB3L1Q96BA8 519 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TMCO6Q96DC7 493 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 MS4A6EQ96DS6 147 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ATXN7L3BQ96GX2 97 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF486Q96H40 463 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 PPM1MQ96MI6 270 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF578Q96N58 590 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 CDCA3Q99618 268 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 MRI1Q9BV20 369 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ABCG5Q9H222 651 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SPC25Q9HBM1 224 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ZFP64Q9NPA5 681 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 PCDH12Q9NPG4 1184 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SLC17A5Q9NRA2 495 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TMEM39AQ9NV64 488 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TXNL4BQ9NX01 149 aaKnown RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SPG21Q9NZD8 308 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 HCSTQ9UBK5 93 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 CHRNA9Q9UGM1 479 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 CYB5R1Q9UHQ9 305 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 RAPGEFL1Q9UHV5 662 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TMEM98Q9Y2Y6 226 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 PCDHGA9Q9Y5G4 932 aaKnown RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 DGKBQ9Y6T7 804 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TRAV19A0A0A6YYK7 116 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 EFCAB9A8MZ26 197 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 B4DXG7 233 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 UBXN7O94888 489 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ALX3O95076 343 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 NKX2-2O95096 273 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 PCDH8O95206 1070 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 RAB36O95755 333 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 CHRM4P08173 479 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 UCHL1P09936 223 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 IGFBP3P17936 291 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 FSTP19883 344 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 RORAP35398 523 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 RPS19P39019 145 aaKnown RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 MAP2K4P45985 399 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF84P51523 738 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 MRPL28Q13084 256 aaKnown RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 KLF9Q13886 244 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SCARB2Q14108 478 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 STARD3Q14849 445 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 PCSK7Q16549 785 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TMEM132AQ24JP5 1023 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SLC35D3Q5M8T2 416 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TYW3Q6IPR3 259 aaKnown RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SMARCD3Q6STE5 483 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TMC5Q6UXY8 1006 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 MBOAT1Q6ZNC8 495 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF620Q6ZNG0 422 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 FAM122BQ7Z309 247 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 DCUN1D3Q8IWE4 304 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TAB3Q8N5C8 712 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 HORMAD2Q8N7B1 307 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TRIML2Q8N7C3 387 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 PNPLA1Q8N8W4 532 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 DBF4BQ8NFT6 615 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 OR10G2Q8NGC3 310 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 WDR48Q8TAF3 677 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SMG7Q92540 1137 aaKnown RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 NSMAFQ92636 917 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 MSANTD3Q96H12 275 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TEFMQ96QE5 360 aaKnown RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 FEVQ99581 238 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SOX17Q9H6I2 414 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ASB8Q9H765 288 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 EMC7Q9NPA0 242 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 IL23AQ9NPF7 189 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 IMP3Q9NV31 184 aaKnown RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 WARS2Q9UGM6 360 aaKnown RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF229Q9UJW7 825 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ACSL5Q9ULC5 683 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SCML1Q9UN30 329 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 CENPFP49454 3210 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 NUP214P35658 2090 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ATG2BQ96BY7 2078 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TRIM43BA6NCK2 446 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 CYR61O00622 381 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TSPAN6O43657 245 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SLC19A2O60779 497 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 XYLBO75191 536 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ITGA10O75578 1167 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TRPA1O75762 1119 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 CLIC3O95833 236 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 AGR2O95994 175 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms