RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 TRA2AQ13595 282 aaKnown RBP eCLIP2.88□□□□□ -1.95
CNOT2-216ENST00000548939 GPR33Q49SQ1 333 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 IGSF11Q5DX21 431 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 RAB41Q5JT25 222 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 EOGTQ5NDL2 527 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 KHDRBS2Q5VWX1 349 aaKnown RBP2.88□□□□□ -1.95
CNOT2-216ENST00000548939 TMEM211Q6ICI0 200 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 NUP54Q7Z3B4 507 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 ZC3H3Q8IXZ2 948 aaKnown RBP2.88□□□□□ -1.95
CNOT2-216ENST00000548939 FAM9BQ8IZU0 186 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 CSNK1G2-AS1Q8NCQ2 148 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 OR4K1Q8NGD4 311 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 OR4D10Q8NGI6 311 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 OR10Q1Q8NGQ4 319 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 ZNF564Q8TBZ8 553 aaPredicted RBP2.88□□□□□ -1.95
CNOT2-216ENST00000548939 NXF3Q9H4D5 531 aaKnown RBP2.88□□□□□ -1.95
CNOT2-216ENST00000548939 ECT2Q9H8V3 914 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 PSTPIP2Q9H939 334 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 LY9Q9HBG7 655 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 DUS2Q9NX74 493 aaKnown RBP2.88□□□□□ -1.95
CNOT2-216ENST00000548939 NLGN3Q9NZ94 848 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 ABCD2Q9UBJ2 740 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 PRDM4Q9UKN5 801 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 CCL26Q9Y258 94 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 TNRC6BQ9UPQ9 1833 aaKnown RBP2.88□□□□□ -1.95
CNOT2-216ENST00000548939 NFASCO94856 1347 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 PHLPP2Q6ZVD8 1323 aa2.88□□□□□ -1.95
CNOT2-216ENST00000548939 MYLKQ15746 1914 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 ESYT2A0FGR8 921 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 PGPEP1LA6NFU8 196 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 NEMP2A6NFY4 417 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 K7EQS6 105 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 CHMP2AO43633 222 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 TLX2O43763 284 aaPredicted RBP2.87□□□□□ -1.95
CNOT2-216ENST00000548939 USO1O60763 962 aaKnown RBP2.87□□□□□ -1.95
CNOT2-216ENST00000548939 RTN2O75298 545 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 KRT6AP02538 564 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 KRT6BP04259 564 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 KRT7P08729 469 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 DANCRP0C864 163 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 IRF2P14316 349 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 ZNF19P17023 458 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 MATR3P43243 847 aaKnown RBP eCLIP2.87□□□□□ -1.959e-7■■■■□ 26.2
CNOT2-216ENST00000548939 BRCC3P46736 316 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 UQCRFS1P47985 274 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 KRT6CP48668 564 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 DCDC1P59894 354 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 KDSRQ06136 332 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 TRAP1Q12931 704 aaKnown RBP2.87□□□□□ -1.95
CNOT2-216ENST00000548939 PLD1Q13393 1074 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 PDGFRLQ15198 375 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 MCMDC2Q4G0Z9 681 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 CEP55Q53EZ4 464 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 ATAD3CQ5T2N8 411 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 AGAP7PQ5VUJ5 663 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 ZNF410Q86VK4 478 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 CDR2LQ86X02 465 aaPredicted RBP2.87□□□□□ -1.95
CNOT2-216ENST00000548939 EID2Q8N6I1 236 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 C4orf32Q8N8J7 132 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 MCUQ8NE86 351 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 SPPL2AQ8TCT8 520 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 MRAPQ8TCY5 172 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 PTPMT1Q8WUK0 201 aaPredicted RBP2.87□□□□□ -1.95
CNOT2-216ENST00000548939 SNRNP27Q8WVK2 155 aaKnown RBP2.87□□□□□ -1.95
CNOT2-216ENST00000548939 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.87□□□□□ -1.95
CNOT2-216ENST00000548939 SGF29Q96ES7 293 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 MTMR9Q96QG7 549 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 CCNL2Q96S94 520 aaPredicted RBP2.87□□□□□ -1.95
CNOT2-216ENST00000548939 GPR174Q9BXC1 333 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 YTHDF1Q9BYJ9 559 aaKnown RBP2.87□□□□□ -1.95
CNOT2-216ENST00000548939 RNF41Q9H4P4 317 aaPredicted RBP2.87□□□□□ -1.95
CNOT2-216ENST00000548939 MAD2L2Q9UI95 211 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 IKZF3Q9UKT9 509 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 ELF5Q9UKW6 265 aaPredicted RBP2.87□□□□□ -1.95
CNOT2-216ENST00000548939 NTNG1Q9Y2I2 539 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 PCDHGA1Q9Y5H4 931 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 UBE4BO95155 1302 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 NEDD4P46934 1319 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 SDK2Q58EX2 2172 aa2.87□□□□□ -1.95
CNOT2-216ENST00000548939 MYH9P35579 1960 aaKnown RBP2.87□□□□□ -1.95
CNOT2-216ENST00000548939 CSMD2Q7Z408 3487 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 FN1P02751 2386 aaKnown RBP2.86□□□□□ -1.95
CNOT2-216ENST00000548939 TMEM150BA6NC51 233 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 FAM220BPB1ANY3 271 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 SLC1A7O00341 560 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 FGF19O95750 216 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 APODP05090 189 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 GABRG2P18507 467 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 TRIM21P19474 475 aaKnown RBP2.86□□□□□ -1.95
CNOT2-216ENST00000548939 AADACP22760 399 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 DNASE1P24855 282 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 MPZP25189 248 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 PSMB10P40306 273 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 TNFSF9P41273 254 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 ACADVLP49748 655 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 VAMP7P51809 220 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 MAPK12P53778 367 aa2.86□□□□□ -1.95
CNOT2-216ENST00000548939 NDUFV3P56181 108 aaKnown RBP2.86□□□□□ -1.95
CNOT2-216ENST00000548939 C21orf59P57076 290 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms