RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 ACADMP11310 421 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 PTGER1P34995 402 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 PIK3CBP42338 1070 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 SLC9A3P48764 834 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 C2orf80Q0P641 193 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 IGSF11Q5DX21 431 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 ARMC4Q5T2S8 1044 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 PXDC1Q5TGL8 231 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 KIAA1161Q6NSJ0 714 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 KCTD20Q7Z5Y7 419 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 C11orf96Q7Z7L8 435 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 PGBD3Q8N328 593 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 OR5AR1Q8NGP9 310 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.19□□□□□ -0.14
CHFR-223ENST00000544268 MSANTD3Q96H12 275 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 ZNF514Q96K75 400 aaPredicted RBP14.19□□□□□ -0.14
CHFR-223ENST00000544268 TEX101Q9BY14 249 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 WDR26Q9H7D7 661 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 BRF2Q9HAW0 419 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 DMRT3Q9NQL9 472 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 NUFIP1Q9UHK0 495 aaKnown RBP14.19□□□□□ -0.14
CHFR-223ENST00000544268 SNX11Q9Y5W9 270 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 PRAMEF33A0A0G2JMD5 474 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 TRIM77I1YAP6 450 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 M0R082 166 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 PRMT3O60678 531 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 PRAMEF10O60809 474 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 ADRA2AP08913 450 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 PSMB5P28074 263 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 SOAT1P35610 550 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 TRIM23P36406 574 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 CBX5P45973 191 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 IDH2P48735 452 aaKnown RBP14.19□□□□□ -0.14
CHFR-223ENST00000544268 DOC2BQ14184 412 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 MLF2Q15773 248 aaPredicted RBP14.19□□□□□ -0.14
CHFR-223ENST00000544268 FAM214AQ32MH5 1076 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 RPS26P11Q5JNZ5 115 aaPredicted RBP14.19□□□□□ -0.14
CHFR-223ENST00000544268 ERICH5Q6P6B1 374 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 DEFB123Q8N688 67 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 METTL2AQ96IZ6 378 aaKnown RBP14.19□□□□□ -0.14
CHFR-223ENST00000544268 LINC00615Q96LM1 132 aaPredicted RBP14.19□□□□□ -0.14
CHFR-223ENST00000544268 SLC30A2Q9BRI3 323 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 DOHHQ9BU89 302 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 ZNF556Q9HAH1 456 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 BTNL2Q9UIR0 455 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 CA14Q9ULX7 337 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 GPR34Q9UPC5 381 aa14.19□□□□□ -0.14
CHFR-223ENST00000544268 OR5K4A6NMS3 321 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 WASHC1A8K0Z3 465 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 TNFRSF11BO00300 401 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 PCDH17O14917 1159 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 SLC31A1O15431 190 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 TNFRSF21O75509 655 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 TBX6O95947 436 aaPredicted RBP14.18□□□□□ -0.14
CHFR-223ENST00000544268 IL3P08700 152 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 FURINP09958 794 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 GABRG2P18507 467 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 UQCRC1P31930 480 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 SOX6P35712 828 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 POU6F2P78424 691 aaPredicted RBP14.18□□□□□ -0.14
CHFR-223ENST00000544268 ZNF763Q0D2J5 394 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 VEZF1Q14119 521 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 EXOC3L2Q2M3D2 409 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 WASH2PQ6VEQ5 465 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 USP30Q70CQ3 517 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 OLIG3Q7RTU3 272 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 SLC46A3Q7Z3Q1 461 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 SLC44A2Q8IWA5 706 aaPredicted RBP14.18□□□□□ -0.14
CHFR-223ENST00000544268 LRRC56Q8IYG6 542 aaPredicted RBP14.18□□□□□ -0.14
CHFR-223ENST00000544268 TCTE3Q8IZS6 198 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 C16orf78Q8WTQ4 265 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 DEDD2Q8WXF8 326 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 FOPNLQ96NB1 174 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 C17orf62Q9BQA9 187 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 C1QTNF7Q9BXJ2 289 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 REEP4Q9H6H4 257 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 SLC23A2Q9UGH3 650 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 TEKT2Q9UIF3 430 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 NCKAP1Q9Y2A7 1128 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 SNX8Q9Y5X2 465 aa14.18□□□□□ -0.14
CHFR-223ENST00000544268 ACSL1P33121 698 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 IGFALSP35858 605 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 MLLT3P42568 568 aaPredicted RBP14.17□□□□□ -0.14
CHFR-223ENST00000544268 TPMTP51580 245 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 SELENOWP63302 87 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 CSNK2BP67870 215 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 SPIBQ01892 262 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 TNK1Q13470 666 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 UAP1L1Q3KQV9 507 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 SPIN4Q56A73 249 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 CREB3L2Q70SY1 520 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 HMGN2P46Q86SG4 172 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 TSPYL5Q86VY4 417 aaPredicted RBP14.17□□□□□ -0.14
CHFR-223ENST00000544268 C11orf65Q8NCR3 313 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 OR2L2Q8NH16 312 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 HMGB4Q8WW32 186 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 GTPBP3Q969Y2 492 aaKnown RBP14.17□□□□□ -0.14
CHFR-223ENST00000544268 TBC1D20Q96BZ9 403 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 CEP19Q96LK0 163 aa14.17□□□□□ -0.14
CHFR-223ENST00000544268 WFDC6Q9BQY6 131 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms