RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 FAM46DQ8NEK8 389 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 APH1BQ8WW43 257 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 RSC1A1Q92681 617 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 GAS2L1Q99501 681 aaPredicted RBP16.05■□□□□ 0.16
PTPRO-209ENST00000543886 RSPO3Q9BXY4 272 aaPredicted RBP16.05■□□□□ 0.16
PTPRO-209ENST00000543886 DAPP1Q9UN19 280 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 PCDHGB1Q9Y5G3 927 aa16.05■□□□□ 0.16
PTPRO-209ENST00000543886 TRBV4-1A0A0J9YWV2 114 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 ZNF99A8MXY4 864 aaPredicted RBP16.04■□□□□ 0.16
PTPRO-209ENST00000543886 FAAHO00519 579 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 ASNA1O43681 348 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 MRPS14O60783 128 aaKnown RBP16.04■□□□□ 0.16
PTPRO-209ENST00000543886 UGT2B17O75795 530 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 OXSR1O95747 527 aaPredicted RBP16.04■□□□□ 0.16
PTPRO-209ENST00000543886 XKP51811 444 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 SIM1P81133 766 aaPredicted RBP16.04■□□□□ 0.16
PTPRO-209ENST00000543886 EMX1Q04741 257 aaPredicted RBP16.04■□□□□ 0.16
PTPRO-209ENST00000543886 RUNX2Q13950 521 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 CCDC85BQ15834 202 aaPredicted RBP16.04■□□□□ 0.16
PTPRO-209ENST00000543886 DCST1Q5T197 706 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 ATAD3BQ5T9A4 648 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 RNF44Q7L0R7 432 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 OLIG3Q7RTU3 272 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 RBM45Q8IUH3 476 aaKnown RBP16.04■□□□□ 0.16
PTPRO-209ENST00000543886 RBM12BQ8IXT5 1001 aaKnown RBP16.04■□□□□ 0.16
PTPRO-209ENST00000543886 SVOPQ8N4V2 548 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 FAM174AQ8TBP5 190 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 ZDHHC1Q8WTX9 485 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 RAB2BQ8WUD1 216 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 COL26A1Q96A83 441 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 CSF3RQ99062 836 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 ACTRT3Q9BYD9 372 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 IMPAD1Q9NX62 359 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 SPACA6W5XKT8 324 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 TMEM265A0A087WTH1 108 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 OR5K3A6NET4 321 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 B4DGG1 531 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 M0R3H8 397 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 GASTP01350 101 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 CDK4P11802 303 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 ELAVL4P26378 380 aaKnown RBP16.04■□□□□ 0.16
PTPRO-209ENST00000543886 MAPK10P53779 464 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 OLR1P78380 273 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 COL13A1Q5TAT6 717 aaPredicted RBP16.04■□□□□ 0.16
PTPRO-209ENST00000543886 ZNF770Q6IQ21 691 aaPredicted RBP16.04■□□□□ 0.16
PTPRO-209ENST00000543886 C16orf62Q7Z3J2 963 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 LACC1Q8IV20 430 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 OR4D11Q8NGI4 311 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 RORBQ92753 470 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 DHRS1Q96LJ7 313 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 MS4A4EQ96PG1 132 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 ANKRA2Q9H9E1 313 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 LYRM4Q9HD34 91 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 PRDM9Q9NQV7 894 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 CALML5Q9NZT1 146 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 LIPT1Q9Y234 373 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 PCDHGA10Q9Y5H3 936 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 SLC22A7Q9Y694 548 aa16.04■□□□□ 0.16
PTPRO-209ENST00000543886 IGHV1OR15-9A0A0B4J2B8 117 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 ZNF860A6NHJ4 632 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 FAM227AF5H4B4 570 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 CASC3O15234 703 aaKnown RBP16.03■□□□□ 0.16
PTPRO-209ENST00000543886 PFDN1O60925 122 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 SEMA7AO75326 666 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 INMTO95050 263 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 ADAP00813 363 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 CCNA2P20248 432 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 KLHL17Q6TDP4 642 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 FAM92BQ6ZTR7 304 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 AHSA2Q719I0 299 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 HMGN2P46Q86SG4 172 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 CSNK1A1LQ8N752 337 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 FAR1Q8WVX9 515 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 ITFG2Q969R8 447 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 CCDC3Q9BQI4 270 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 RHNO1Q9BSD3 238 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 LRRC61Q9BV99 259 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 ACAD8Q9UKU7 415 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 KCNE3Q9Y6H6 103 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 SLCO1B1Q9Y6L6 691 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 OR10H3O60404 316 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 MT-ND2P03891 347 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 MANEAQ5SRI9 462 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 CCDC81Q6ZN84 652 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 PRSS48Q7RTY5 328 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 OR4N5Q8IXE1 308 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 TRNT1Q96Q11 434 aaKnown RBP16.03■□□□□ 0.16
PTPRO-209ENST00000543886 ORAI3Q9BRQ5 295 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 FNDC11Q9BVV2 318 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 PINK1Q9BXM7 581 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 SLC13A4Q9UKG4 626 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 DUSP12Q9UNI6 340 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 MGAT4BQ9UQ53 548 aa16.03■□□□□ 0.16
PTPRO-209ENST00000543886 MRPS2Q9Y399 296 aaKnown RBP16.03■□□□□ 0.16
PTPRO-209ENST00000543886 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.02■□□□□ 0.15
PTPRO-209ENST00000543886 A0A1W2PPW3 197 aa16.02■□□□□ 0.15
PTPRO-209ENST00000543886 FADS2O95864 444 aaKnown RBP16.02■□□□□ 0.15
PTPRO-209ENST00000543886 TYRP1P17643 537 aa16.02■□□□□ 0.15
PTPRO-209ENST00000543886 MAP2K4P45985 399 aa16.02■□□□□ 0.15
PTPRO-209ENST00000543886 MAN2A2P49641 1150 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms