RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 CREB3L2Q70SY1 520 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 MEX3DQ86XN8 651 aaKnown RBP8.64□□□□□ -1.03
THBS3-211ENST00000541990 NANOGP1Q8N7R0 232 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 GDPD1Q8N9F7 314 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 C7orf57Q8NEG2 295 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 OR11H4Q8NGC9 324 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 PMEPA1Q969W9 287 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 TMEM80Q96HE8 168 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 SENP5Q96HI0 755 aaPredicted RBP8.64□□□□□ -1.03
THBS3-211ENST00000541990 ZSCAN5AQ9BUG6 496 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 GDE1Q9NZC3 331 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 RAB23Q9ULC3 237 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 SPIN1Q9Y657 262 aaPredicted RBP8.64□□□□□ -1.03
THBS3-211ENST00000541990 CCDC88CQ9P219 2028 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 FAM240BA0A1B0GVZ2 78 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 ISM1B1AKI9 464 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 E7EQ34 232 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 TRIM77I1YAP6 450 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 MYL12BO14950 172 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 SPINT1O43278 529 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 LYRM1O43325 122 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 PSIP1O75475 530 aaKnown RBP8.64□□□□□ -1.03
THBS3-211ENST00000541990 C6orf47O95873 294 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 ACADMP11310 421 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 MYL12AP19105 171 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 PRPH2P23942 346 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 MAPK1P28482 360 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 AVPR1BP47901 424 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 CTBP2P56545 445 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 MC1RQ01726 317 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 ZNF267Q14586 743 aaPredicted RBP8.64□□□□□ -1.03
THBS3-211ENST00000541990 FCN2Q15485 313 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 PRSS53Q2L4Q9 553 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 ZNF628Q5EBL2 1059 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 CPTPQ5TA50 214 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 DDI2Q5TDH0 399 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 TRIQKQ629K1 86 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 TMEM65Q6PI78 240 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 USP30Q70CQ3 517 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 ZNF767PQ75MW2 155 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 RBM45Q8IUH3 476 aaKnown RBP8.64□□□□□ -1.03
THBS3-211ENST00000541990 OR8H3Q8N146 312 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 CHCHD4Q8N4Q1 142 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 PLA2G15Q8NCC3 412 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 FAM46DQ8NEK8 389 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 HUS1BQ8NHY5 278 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 CSGALNACT1Q8TDX6 532 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 PIP5K1AQ99755 562 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 WACQ9BTA9 647 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 GTPBP2Q9BX10 602 aaKnown RBP8.64□□□□□ -1.03
THBS3-211ENST00000541990 C1QTNF6Q9BXI9 259 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 PPP1R3EQ9H7J1 279 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 PRSS16Q9NQE7 514 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 RBFOX1Q9NWB1 397 aaKnown RBP8.64□□□□□ -1.03
THBS3-211ENST00000541990 REV1Q9UBZ9 1251 aa8.64□□□□□ -1.03
THBS3-211ENST00000541990 NINQ8N4C6 2090 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 NCOR1O75376 2440 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 A0A1B0GVC2 190 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 SH3D21A4FU49 640 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 A6NIN4 97 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 H3BN98 237 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 PRKYO43930 277 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 PDGFAP04085 211 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 IDSP22304 550 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 SLC6A12P48065 614 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 CTSCP53634 463 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 CLDN20P56880 219 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 RPS26P62854 115 aaKnown RBP8.63□□□□□ -1.03
THBS3-211ENST00000541990 PCDH1Q08174 1060 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 CNTN1Q12860 1018 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 SNTA1Q13424 505 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 PUM1Q14671 1186 aaKnown RBP eCLIP8.63□□□□□ -1.03
THBS3-211ENST00000541990 ZBTB37Q5TC79 503 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 Q6ZS52 159 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 MSANTD1Q6ZTZ1 278 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 TPRG1Q6ZUI0 275 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 MMP21Q8N119 569 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 L3MBTL4Q8NA19 623 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 SLC37A3Q8NCC5 494 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 SMRP1Q8NCR6 262 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 OR6C4Q8NGE1 309 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 CHTF18Q8WVB6 975 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 KLHL6Q8WZ60 621 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 SUSD6Q92537 303 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 FCRL1Q96LA6 429 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 KCNK12Q9HB15 430 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 RDH14Q9HBH5 336 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 MARK1Q9P0L2 795 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 SCML1Q9UN30 329 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 TRBC2A0A5B9 178 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 K7EQS6 105 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 SAP18O00422 153 aaKnown RBP8.63□□□□□ -1.03
THBS3-211ENST00000541990 LANCL1O43813 399 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 SLC22A5O76082 557 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 PCDH8O95206 1070 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 GSTM1P09488 218 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 PIPP12273 146 aaPredicted RBP8.63□□□□□ -1.03
THBS3-211ENST00000541990 TNNI3P19429 210 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 M6PRP20645 277 aa8.63□□□□□ -1.03
THBS3-211ENST00000541990 COL9A1P20849 921 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms