RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 ABCD3P28288 659 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 TNFRSF8P28908 595 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 SLCO1A2P46721 670 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 NUP107P57740 925 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 KCNJ2P63252 427 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 PMPCAQ10713 525 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 RPS6KA2Q15349 733 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 PRSS53Q2L4Q9 553 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 TRMT12Q53H54 448 aaKnown RBP15.39■□□□□ 0.05
DDB1-215ENST00000539712 DESI1Q6ICB0 168 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 SCIMPQ6UWF3 145 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 SRRM1Q8IYB3 904 aaKnown RBP15.39■□□□□ 0.05
DDB1-215ENST00000539712 EID3Q8N140 333 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 SPPL2AQ8TCT8 520 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 KLHL29Q96CT2 875 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 TRIM44Q96DX7 344 aaPredicted RBP15.39■□□□□ 0.05
DDB1-215ENST00000539712 TREX2Q9BQ50 279 aaPredicted RBP15.39■□□□□ 0.05
DDB1-215ENST00000539712 ACKR4Q9NPB9 350 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 SIRT5Q9NXA8 310 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 RNF6Q9Y252 685 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 DLGAP4Q9Y2H0 992 aa15.39■□□□□ 0.05
DDB1-215ENST00000539712 FREM3P0C091 2139 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 EXPH5Q8NEV8 1989 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 GOLGA6L10A6NI86 522 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 BCKDKO14874 412 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 PCDH7O60245 1069 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 HCN1O60741 890 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 GLRA3O75311 464 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 ABCB1P08183 1280 aaPredicted RBP15.38■□□□□ 0.05
DDB1-215ENST00000539712 IL3P08700 152 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 PCSK2P16519 638 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 ACVR2AP27037 513 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 HMOX2P30519 316 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 CRHR1P34998 444 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 PTGER4P35408 488 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 DEKP35659 375 aaKnown RBP15.38■□□□□ 0.05
DDB1-215ENST00000539712 ALDH9A1P49189 494 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 EMDP50402 254 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 TFF3Q07654 80 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 TMEM211Q6ICI0 200 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 CCDC71Q8IV32 467 aaPredicted RBP15.38■□□□□ 0.05
DDB1-215ENST00000539712 PRR22Q8IZ63 422 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 CNPY4Q8N129 248 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 CCNYL1Q8N7R7 359 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 LILRB4Q8NHJ6 448 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.38■□□□□ 0.05
DDB1-215ENST00000539712 EPS8L3Q8TE67 593 aaKnown RBP15.38■□□□□ 0.05
DDB1-215ENST00000539712 C16orf78Q8WTQ4 265 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 DIO2Q92813 273 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 SECISBP2Q96T21 854 aaKnown RBP15.38■□□□□ 0.05
DDB1-215ENST00000539712 DOHHQ9BU89 302 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 FAIM2Q9BWQ8 316 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 ANGPTL4Q9BY76 406 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 BRINP2Q9C0B6 783 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 ENKD1Q9H0I2 346 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 UBQLN3Q9H347 655 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 ANKZF1Q9H8Y5 726 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 ANKRA2Q9H9E1 313 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 MID1IP1Q9NPA3 183 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 UTS2RQ9UKP6 389 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 PSME2Q9UL46 239 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 BOKQ9UMX3 212 aaPredicted RBP15.38■□□□□ 0.05
DDB1-215ENST00000539712 STK38LQ9Y2H1 464 aa15.38■□□□□ 0.05
DDB1-215ENST00000539712 TRGV5A0A0B4J1U4 118 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 NME6O75414 186 aaPredicted RBP15.37■□□□□ 0.05
DDB1-215ENST00000539712 TOXO94900 526 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 GLI4P10075 376 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 MYL2P10916 166 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 DRD2P14416 443 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 COX6B1P14854 86 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 TIA1P31483 386 aaKnown RBP eCLIP15.37■□□□□ 0.05
DDB1-215ENST00000539712 CASP3P42574 277 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 MAN2A2P49641 1150 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 NAGLUP54802 743 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 DNAJB13P59910 316 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 MRPS35P82673 323 aaKnown RBP15.37■□□□□ 0.05
DDB1-215ENST00000539712 CEBPEQ15744 281 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 ZNF628Q5EBL2 1059 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 HLA-DQA1Q5Y7H0 255 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 FRMD7Q6ZUT3 714 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 CCDC116Q8IYX3 515 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 CA5BP1Q8WTZ4 195 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 UBLCP1Q8WVY7 318 aaPredicted RBP15.37■□□□□ 0.05
DDB1-215ENST00000539712 RND1Q92730 232 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 HGDQ93099 445 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 CCDC126Q96EE4 140 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 RILPQ96NA2 401 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 SPOCK3Q9BQ16 436 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 TTYH2Q9BSA4 534 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 ITPAQ9BY32 194 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 UCK2Q9BZX2 261 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 SLC6A15Q9H2J7 730 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 NPDC1Q9NQX5 325 aaPredicted RBP15.37■□□□□ 0.05
DDB1-215ENST00000539712 OXSMQ9NWU1 459 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 QPCTLQ9NXS2 382 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 COQ3Q9NZJ6 369 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 PLLPQ9Y342 182 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 CCL27Q9Y4X3 112 aa15.37■□□□□ 0.05
DDB1-215ENST00000539712 CAPN14A8MX76 684 aa15.36■□□□□ 0.05
DDB1-215ENST00000539712 TP53I11O14683 189 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms