RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 C13orf42A0A1B0GVH6 325 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 GRXCR2A6NFK2 248 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 TNFRSF10AO00220 468 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 B4GAT1O43505 415 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 SLC19A2O60779 497 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 CSTAP01040 98 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 LCKP06239 509 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 C5AR1P21730 350 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 GADD45AP24522 165 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 DCKP27707 260 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 ADH7P40394 386 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 SMU1Q2TAY7 513 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 SHFQ7M4L6 423 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 IQCF1Q8N6M8 205 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 HORMAD2Q8N7B1 307 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 MFSD2AQ8NA29 543 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 OR9Q2Q8NGE9 314 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 OR13J1Q8NGT2 312 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 CMKLR1Q99788 373 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 APOBEC3BQ9UH17 382 aaKnown RBP13.84□□□□□ -0.19
CACNB1-206ENST00000539338 IL20RAQ9UHF4 553 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 RARRES3Q9UL19 164 aa13.84□□□□□ -0.19
CACNB1-206ENST00000539338 C2orf74A8MZ97 194 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 MAPK3P27361 379 aaPredicted RBP13.83□□□□□ -0.19
CACNB1-206ENST00000539338 PSMA6P60900 246 aaKnown RBP13.83□□□□□ -0.19
CACNB1-206ENST00000539338 SNTA1Q13424 505 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 C1orf61Q13536 156 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 LRP8Q14114 963 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 RGNQ15493 299 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 FIGNL1Q6PIW4 674 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 UGT2A3Q6UWM9 527 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 TCEAL8Q8IYN2 117 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 ADGRG5Q8IZF4 528 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 LRRC25Q8N386 305 aaPredicted RBP13.83□□□□□ -0.19
CACNB1-206ENST00000539338 SYNPOQ8N3V7 929 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 NUDT15Q9NV35 164 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 LIPT1Q9Y234 373 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 WDR37Q9Y2I8 494 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 GPR52Q9Y2T5 361 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 SPEF1Q9Y4P9 236 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 PCDHGB6Q9Y5F9 930 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 PCDHGB5Q9Y5G0 923 aa13.83□□□□□ -0.19
CACNB1-206ENST00000539338 ZBTB42B2RXF5 422 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 RNGTTO60942 597 aaKnown RBP13.83□□□□□ -0.2
CACNB1-206ENST00000539338 GNAO1P09471 354 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 RBM34P42696 430 aaKnown RBP13.83□□□□□ -0.2
CACNB1-206ENST00000539338 CLCN2P51788 898 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 GPR26Q8NDV2 337 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 CIDECQ96AQ7 238 aaPredicted RBP13.83□□□□□ -0.2
CACNB1-206ENST00000539338 ECHDC3Q96DC8 303 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 PBX4Q9BYU1 374 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 HHATLQ9HCP6 504 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 MAGED1Q9Y5V3 778 aaPredicted RBP13.83□□□□□ -0.2
CACNB1-206ENST00000539338 HSPE1-MOB4S4R3N1 261 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 HCKP08631 526 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 ITGA5P08648 1049 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 CDK4P11802 303 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 GAS6Q14393 721 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 PLXDC1Q8IUK5 500 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 H3BMQ9 156 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 FBP2O00757 339 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 SPARCP09486 303 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 GRPRP30550 384 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 ZNF550Q7Z398 422 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 SLC44A3Q8N4M1 653 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 COG8Q96MW5 612 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 NPLQ9BXD5 320 aaPredicted RBP13.83□□□□□ -0.2
CACNB1-206ENST00000539338 METTL7AQ9H8H3 244 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 TPD52L2O43399 206 aaKnown RBP13.83□□□□□ -0.2
CACNB1-206ENST00000539338 SCGB1D2O95969 90 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 MAP2K3P46734 347 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 INHBCP55103 352 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 UGT3A2Q3SY77 523 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 CCSAPQ6IQ19 270 aaPredicted RBP13.83□□□□□ -0.2
CACNB1-206ENST00000539338 PIAS4Q8N2W9 510 aaPredicted RBP13.83□□□□□ -0.2
CACNB1-206ENST00000539338 FAM46AQ96IP4 442 aaKnown RBP13.83□□□□□ -0.2
CACNB1-206ENST00000539338 PTCHD1Q96NR3 888 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 ORAI3Q9BRQ5 295 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 PLEKHA6Q9Y2H5 1048 aa13.83□□□□□ -0.2
CACNB1-206ENST00000539338 HCRTR2O43614 444 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 NTHL1P78549 312 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 GK3PQ14409 553 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 MAD2L1BPQ15013 274 aaPredicted RBP13.82□□□□□ -0.2
CACNB1-206ENST00000539338 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.82□□□□□ -0.2
CACNB1-206ENST00000539338 GRHL2Q6ISB3 625 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 PRSS48Q7RTY5 328 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 AMIGO1Q86WK6 493 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 C12orf40Q86WS4 652 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 ANKRD13BQ86YJ7 626 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 STUB1Q9UNE7 303 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 PLD2O14939 933 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 ARPC4P59998 168 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 SIM1P81133 766 aaPredicted RBP13.82□□□□□ -0.2
CACNB1-206ENST00000539338 RPA4Q13156 261 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 CDK5R2Q13319 367 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 HSD17B12Q53GQ0 312 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 ZNF542PQ5EBM4 170 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 SLC25A25Q6KCM7 469 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 KCTD9Q7L273 389 aa13.82□□□□□ -0.2
CACNB1-206ENST00000539338 OR4K5Q8NGD3 323 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms