RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 BTKQ06187 659 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 CDSNQ15517 529 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 KRTCAP3Q53RY4 240 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 SPIN4Q56A73 249 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 CES4AQ5XG92 561 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 OPN5Q6U736 354 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 MAMDC2Q7Z304 686 aaPredicted RBP15.1■□□□□ 0.01
ATL3-202ENST00000535789 C7orf57Q8NEG2 295 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 ADCY4Q8NFM4 1077 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 OR10G3Q8NGC4 313 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 OR6Y1Q8NGX8 325 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 OR2T11Q8NH01 316 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.1■□□□□ 0.01
ATL3-202ENST00000535789 C16orf78Q8WTQ4 265 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 ITLN2Q8WWU7 325 aaPredicted RBP15.1■□□□□ 0.01
ATL3-202ENST00000535789 CTHRC1Q96CG8 243 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 OR10A5Q9H207 317 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 TUBB1Q9H4B7 451 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 ZDHHC11Q9H8X9 412 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 ANKRA2Q9H9E1 313 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 SIRT5Q9NXA8 310 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 TUBA8Q9NY65 449 aaPredicted RBP15.1■□□□□ 0.01
ATL3-202ENST00000535789 EXO1Q9UQ84 846 aaKnown RBP15.1■□□□□ 0.01
ATL3-202ENST00000535789 HRH3Q9Y5N1 445 aa15.1■□□□□ 0.01
ATL3-202ENST00000535789 A0A1B0GUH1 482 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 LRRC3CA6NJW4 275 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 TMEM233B4DJY2 109 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 ADAM10O14672 748 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 DYRK3O43781 588 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 NME6O75414 186 aaPredicted RBP15.09■□□□□ 0.01
ATL3-202ENST00000535789 CELA3AP09093 270 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 ACSM2AQ08AH3 577 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 CEBPEQ15744 281 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 ZNF628Q5EBL2 1059 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 PRAMEF20Q5VT98 475 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 ACSM2BQ68CK6 577 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 ZNF787Q6DD87 383 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 DESI1Q6ICB0 168 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 SLC29A4Q7RTT9 530 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 TRIM46Q7Z4K8 759 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 SPPL2CQ8IUH8 684 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 NUDCD3Q8IVD9 361 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 GHDCQ8N2G8 530 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 SLC22A8Q8TCC7 542 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 PAQR8Q8TEZ7 354 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 DYDC1Q8WWB3 177 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 PHF12Q96QT6 1004 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 ITPAQ9BY32 194 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 CCDC134Q9H6E4 229 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 UTS2RQ9UKP6 389 aa15.09■□□□□ 0.01
ATL3-202ENST00000535789 CNOT11Q9UKZ1 510 aaKnown RBP15.09■□□□□ 0.01
ATL3-202ENST00000535789 POLR3HQ9Y535 204 aaPredicted RBP15.09■□□□□ 0.01
ATL3-202ENST00000535789 NUP214P35658 2090 aaPredicted RBP15.08■□□□□ 0.01
ATL3-202ENST00000535789 LRBAP50851 2863 aa15.08■□□□□ 0.01
ATL3-202ENST00000535789 A0A1B0GTH9 108 aa15.08■□□□□ 0
ATL3-202ENST00000535789 C2orf92A0A1B0GVN3 265 aa15.08■□□□□ 0
ATL3-202ENST00000535789 CCL21O00585 134 aa15.08■□□□□ 0
ATL3-202ENST00000535789 PCSK2P16519 638 aa15.08■□□□□ 0
ATL3-202ENST00000535789 BGNP21810 368 aa15.08■□□□□ 0
ATL3-202ENST00000535789 MAP4K2Q12851 820 aa15.08■□□□□ 0
ATL3-202ENST00000535789 KIAA0040Q15053 153 aa15.08■□□□□ 0
ATL3-202ENST00000535789 CHI3L2Q15782 390 aa15.08■□□□□ 0
ATL3-202ENST00000535789 NNATQ16517 81 aa15.08■□□□□ 0
ATL3-202ENST00000535789 NTRK2Q16620 822 aa15.08■□□□□ 0
ATL3-202ENST00000535789 TRMT12Q53H54 448 aaKnown RBP15.08■□□□□ 0
ATL3-202ENST00000535789 KANK2Q63ZY3 851 aa15.08■□□□□ 0
ATL3-202ENST00000535789 BICRALQ6AI39 1079 aa15.08■□□□□ 0
ATL3-202ENST00000535789 RGS9BPQ6ZS82 235 aa15.08■□□□□ 0
ATL3-202ENST00000535789 ZCCHC23Q6ZST2 131 aa15.08■□□□□ 0
ATL3-202ENST00000535789 PRR22Q8IZ63 422 aa15.08■□□□□ 0
ATL3-202ENST00000535789 VWA5B2Q8N398 1253 aa15.08■□□□□ 0
ATL3-202ENST00000535789 TMEM251Q8N6I4 163 aa15.08■□□□□ 0
ATL3-202ENST00000535789 RAB3IL1Q8TBN0 382 aa15.08■□□□□ 0
ATL3-202ENST00000535789 EXOSC8Q96B26 276 aaKnown RBP15.08■□□□□ 0
ATL3-202ENST00000535789 NTNG2Q96CW9 530 aa15.08■□□□□ 0
ATL3-202ENST00000535789 MAGED4Q96JG8 741 aa15.08■□□□□ 0
ATL3-202ENST00000535789 SGCZQ96LD1 299 aa15.08■□□□□ 0
ATL3-202ENST00000535789 MAGEB18Q96M61 343 aa15.08■□□□□ 0
ATL3-202ENST00000535789 BRINP2Q9C0B6 783 aa15.08■□□□□ 0
ATL3-202ENST00000535789 NXF5Q9H1B4 397 aaKnown RBP15.08■□□□□ 0
ATL3-202ENST00000535789 SACM1LQ9NTJ5 587 aa15.08■□□□□ 0
ATL3-202ENST00000535789 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.08■□□□□ 0
ATL3-202ENST00000535789 NMRK1Q9NWW6 199 aa15.08■□□□□ 0
ATL3-202ENST00000535789 CSMD1Q96PZ7 3565 aa15.08■□□□□ 0
ATL3-202ENST00000535789 GNG14A0A1W2PPG7 69 aa15.07■□□□□ 0
ATL3-202ENST00000535789 KLF11O14901 512 aa15.07■□□□□ 0
ATL3-202ENST00000535789 CDC40O60508 579 aaKnown RBP eCLIP15.07■□□□□ 0
ATL3-202ENST00000535789 TRIM13O60858 407 aa15.07■□□□□ 0
ATL3-202ENST00000535789 GUCY1B2O75343 617 aa15.07■□□□□ 0
ATL3-202ENST00000535789 RSL1D1O76021 490 aaKnown RBP15.07■□□□□ 0
ATL3-202ENST00000535789 SERPINE1P05121 402 aa15.07■□□□□ 0
ATL3-202ENST00000535789 RFPL3SP0C7P2 107 aa15.07■□□□□ 0
ATL3-202ENST00000535789 CSNK2A2P19784 350 aaPredicted RBP15.07■□□□□ 0
ATL3-202ENST00000535789 CNR1P21554 472 aa15.07■□□□□ 0
ATL3-202ENST00000535789 PRPH2P23942 346 aa15.07■□□□□ 0
ATL3-202ENST00000535789 TACR1P25103 407 aa15.07■□□□□ 0
ATL3-202ENST00000535789 MAGEA5P43359 124 aa15.07■□□□□ 0
ATL3-202ENST00000535789 FBXW4P57775 412 aa15.07■□□□□ 0
ATL3-202ENST00000535789 NAA20P61599 178 aa15.07■□□□□ 0
ATL3-202ENST00000535789 RBPJQ06330 500 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms