RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 OLFM1Q99784 485 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 GABRG3Q99928 467 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 TRIM7Q9C029 511 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 DNAI2Q9GZS0 605 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 LAT2Q9GZY6 243 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 P2RY12Q9H244 342 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 ASB7Q9H672 318 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 GRPEL1Q9HAV7 217 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 XPNPEP1Q9NQW7 623 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 SPHK2Q9NRA0 654 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 COMMD8Q9NX08 183 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 LSM7Q9UK45 103 aaKnown RBP2.95□□□□□ -1.94
SNHG1-202ENST00000535689 STUB1Q9UNE7 303 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 SELENOKQ9Y6D0 94 aa2.95□□□□□ -1.94
SNHG1-202ENST00000535689 PRRC2CQ9Y520 2896 aaKnown RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 TRAV34A0A0B4J273 112 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 TTC26A0AVF1 554 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 VPS37CA5D8V6 355 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 KPNA7A9QM74 516 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 PIRO00625 290 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 DIAPH2O60879 1101 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 AP2A2O94973 939 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 TDP2O95551 362 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 IGKV3-20P01619 116 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 OR4Q2P0C623 313 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 IGHV4-31P0DP07 118 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 MBL2P11226 248 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 ATF6P18850 670 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 CA4P22748 312 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 RPA1P27694 616 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 ALDH4A1P30038 563 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 ACADVLP49748 655 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 RGS7P49802 495 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 VAMP7P51809 220 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 PPP5CP53041 499 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 PEX3P56589 373 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 NOP14P78316 857 aaKnown RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 EIF3IQ13347 325 aaKnown RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 ORC2Q13416 577 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 SCARB2Q14108 478 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 PDIA5Q14554 519 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 OPCMLQ14982 345 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 NECTIN1Q15223 517 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 UGT3A2Q3SY77 523 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 TTC31Q49AM3 519 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 GTDC1Q4AE62 458 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 CFAP221Q4G0U5 840 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 ZNF789Q5FWF6 425 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 DCAF10Q5QP82 559 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 FHL5Q5TD97 284 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 FAM91A1Q658Y4 838 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 FAAP20Q6NZ36 180 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 SPATA19Q7Z5L4 167 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 NRARPQ7Z6K4 114 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 TMEM150AQ86TG1 271 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 TMEM139Q8IV31 216 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 SIX6OS1Q8N1H7 587 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 RAB42Q8N4Z0 105 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 EID2Q8N6I1 236 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 NKAIN3Q8N8D7 197 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 ZNF557Q8N988 423 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 CCDC63Q8NA47 563 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 DDHD1Q8NEL9 900 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 OR4D10Q8NGI6 311 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 WDR36Q8NI36 951 aaKnown RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 LRRC15Q8TF66 581 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 OTUB1Q96FW1 271 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 FAM71F1Q96KD3 344 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 CATSPER2Q96P56 530 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 NODALQ96S42 347 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 ASCL2Q99929 193 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 PSD2Q9BQI7 771 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 CENPOQ9BU64 300 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 MLPHQ9BV36 600 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 SLC2A11Q9BYW1 496 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 CCSER1Q9C0I3 900 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 NACA2Q9H009 215 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 COPS7BQ9H9Q2 264 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 TM9SF3Q9HD45 589 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 MYNNQ9NPC7 610 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 ZDHHC4Q9NPG8 344 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 SDR39U1Q9NRG7 319 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 EXOC1Q9NV70 894 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 OSER1Q9NX31 292 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 P4HTMQ9NXG6 502 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 GCNT4Q9P109 453 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 IL36AQ9UHA7 158 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 ITGA11Q9UKX5 1188 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 MED13LQ71F56 2210 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 USP9YO00507 2555 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-202ENST00000535689 POLQO75417 2590 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 ITPR3Q14573 2671 aa2.94□□□□□ -1.94
SNHG1-202ENST00000535689 FBN2P35556 2912 aa2.93□□□□□ -1.94
SNHG1-202ENST00000535689 IGHV4-4A0A075B6R2 117 aa2.93□□□□□ -1.94
SNHG1-202ENST00000535689 C5orf60A6NFR6 353 aa2.93□□□□□ -1.94
SNHG1-202ENST00000535689 HHLA1C9JL84 531 aa2.93□□□□□ -1.94
SNHG1-202ENST00000535689 NPIPA3F8WFD2 350 aa2.93□□□□□ -1.94
SNHG1-202ENST00000535689 TLR4O00206 839 aa2.93□□□□□ -1.94
SNHG1-202ENST00000535689 OGTO15294 1046 aa2.93□□□□□ -1.94
SNHG1-202ENST00000535689 ZW10O43264 779 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms