RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 FBXO46Q6PJ61 603 aaPredicted RBP17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 ZNF761Q86XN6 746 aaPredicted RBP17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 TMEM25Q86YD3 366 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 SIAH1Q8IUQ4 282 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 RCBTB1Q8NDN9 531 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 DPH2Q9BQC3 489 aaPredicted RBP17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 RNF215Q9Y6U7 377 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 ISPDA4D126 451 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 HMGCLP35914 325 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 SFT2D3Q587I9 215 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 MUS81Q96NY9 551 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 ZNF317Q96PQ6 595 aaPredicted RBP17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 B8ZZF3 427 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 RP2O75695 350 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 HPRP00739 348 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 LPAL2Q16609 132 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 SLC18B1Q6NT16 456 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 OR52E2Q8NGJ4 325 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 CPEB1Q9BZB8 566 aaKnown RBP17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 RGS9O75916 674 aaPredicted RBP17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 CNOT4O95628 575 aaKnown RBP17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 CSF2P04141 144 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 DEFB110Q30KQ9 67 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 LEG1Q6P5S2 330 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 SYNPOQ8N3V7 929 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 POTEKPQ9BYX7 375 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 REV1Q9UBZ9 1251 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 HIF3AQ9Y2N7 669 aa17.31■□□□□ 0.36
SFSWAP-203ENST00000535236 OTOL1A6NHN0 477 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 FGL2Q14314 439 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 C3P1Q6ZMU1 363 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 OR2T4Q8NH00 348 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 RHBDD1Q8TEB9 315 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 GATAD2BQ8WXI9 593 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 CICQ96RK0 1608 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 I3L521 148 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 KLBQ86Z14 1044 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 ELMOD2Q8IZ81 293 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 PIAS4Q8N2W9 510 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 ZFYVE21Q9BQ24 234 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 MMP27Q9H306 513 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 ANKRD28O15084 1053 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 ACTL6BO94805 426 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 ZNF43P17038 809 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 FOLR3P41439 243 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 MAP2K4P45985 399 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 EFR3AQ14156 821 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 UGT2A3Q6UWM9 527 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 MAP3K3Q99759 626 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 CD207Q9UJ71 328 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 UBE2J1Q9Y385 318 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 DUOX1Q9NRD9 1551 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 AGAP5A6NIR3 686 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 SLC35E2BP0CK96 405 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 FNTBP49356 437 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 SF3B4Q15427 424 aaKnown RBP eCLIP17.3■□□□□ 0.363e-7■■■■■ 30.9
SFSWAP-203ENST00000535236 TMEM236Q5W0B7 351 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 VASH1Q7L8A9 365 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 RABEPKQ7Z6M1 372 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 TSPAN33Q86UF1 283 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 ZBTB8BQ8NAP8 495 aaPredicted RBP17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 HINT2Q9BX68 163 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 PELI2Q9HAT8 420 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 PTGDR2Q9Y5Y4 395 aa17.3■□□□□ 0.36
SFSWAP-203ENST00000535236 MYADML2A6NDP7 307 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 LATO43561 262 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 SNAP29O95721 258 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 RPA4Q13156 261 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 PGM2L1Q6PCE3 622 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 RELL1Q8IUW5 271 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 TBC1D15Q8TC07 691 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 C16orf78Q8WTQ4 265 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 ANKMY1Q9P2S6 941 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 CD8B2A6NJW9 211 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 M0R233 179 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 FMO6PO60774 539 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 ZNF865P0CJ78 1059 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 CD8BP10966 210 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 ZNF45Q02386 682 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 CDCA3Q99618 268 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 LMAN1LQ9HAT1 526 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 MAS1P04201 325 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 RAC2P15153 192 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 ERP29P30040 261 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 CLDN8P56748 225 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 SCAPQ12770 1279 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 TREX2Q9BQ50 279 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 HSPB11Q9Y547 144 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 PIGBOS1A0A0B4J2F0 54 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 ATG12O94817 140 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 TIMP1P01033 207 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 ALDOAP04075 364 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 RBM39Q14498 530 aaKnown RBP17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 ECHDC3Q96DC8 303 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 ACTRT3Q9BYD9 372 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 RASAL1O95294 804 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 DRD1P21728 446 aa17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 SLC10A2Q12908 348 aaPredicted RBP17.29■□□□□ 0.36
SFSWAP-203ENST00000535236 SLC35G1Q2M3R5 365 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms