RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	ERICH2	A1L162	156 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	HTR3E	A5X5Y0	456 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ANKRD66	B4E2M5	251 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442		H0YAE9	185 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	EIF3D	O15371	548 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	OAS1	P00973	400 aa	Known RBP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PRB2	P02812	416 aa	Predicted RBP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PRSS2	P07478	247 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	FAM58BP	P0C7Q3	252 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	FAM106CP	P0CH98	169 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	THRA	P10827	490 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	KCNE1	P15382	129 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TCF4	P15884	667 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	POLR2C	P19387	275 aa	Predicted RBP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CD22	P20273	847 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TCEA1	P23193	301 aa	Known RBP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ARCN1	P48444	511 aa	Known RBP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PSMD8	P48556	350 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SLC9A3	P48764	834 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PDLIM4	P50479	330 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PEX5	P50542	639 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MMP15	P51511	669 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	LIMK2	P53671	638 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	NAGLU	P54802	743 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	NAPA	P54920	295 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TPD52	P55327	224 aa	Predicted RBP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	DLX5	P56178	289 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TUBB4B	P68371	445 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PLIN5	Q00G26	463 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SCN1B	Q07699	218 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	GTF2H2	Q13888	395 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	NFE2L1	Q14494	772 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MCMDC2	Q4G0Z9	681 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	OR7E24	Q6IFN5	339 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	GTF2H2C	Q6P1K8	395 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PLXDC2	Q6UX71	529 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	C3P1	Q6ZMU1	363 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	STRADA	Q7RTN6	431 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SYVN1	Q86TM6	617 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MMAA	Q8IVH4	418 aa	Known RBP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	FAM219A	Q8IW50	185 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ITPRIP	Q8IWB1	547 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	RFLNB	Q8N5W9	214 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ARIH2OS	Q8N7S6	290 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	B4GALNT2	Q8NHY0	566 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PHF10	Q8WUB8	498 aa	Known RBP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TMEM255B	Q8WV15	326 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	DAZL	Q92904	295 aa	Known RBP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PHF21B	Q96EK2	531 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PIWIL1	Q96J94	861 aa	Known RBP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MAGED4	Q96JG8	741 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	RMDN2	Q96LZ7	410 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SFXN2	Q96NB2	322 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TAAR6	Q96RI8	345 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	BTBD10	Q9BSF8	475 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CCDC94	Q9BW85	323 aa	Predicted RBP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	XPNPEP1	Q9NQW7	623 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	KCNK7	Q9Y2U2	307 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442	GRIP1	Q9Y3R0	1128 aa		4.06	□□□□□ -1.76
ECHDC1-223	ENST00000534442		A0A0G2JPF8	293 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442		A0A0U1RQK1	487 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ELOVL7	A1L3X0	281 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ZNF320	A2RRD8	509 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442		A4D1N5	150 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ZNF840P	A6NDX5	716 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	LRRIQ4	A6NIV6	560 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	HNRNPCL3	B7ZW38	293 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	C21orf140	B9A014	251 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	C3orf84	H3BNL1	204 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	IFIT3	O14879	490 aa	Known RBP	4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ZNHIT1	O43257	154 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	BUD23	O43709	281 aa	Known RBP	4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	HNRNPCL4	P0DMR1	293 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ODC1	P11926	461 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	GLRA2	P23416	452 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PTPN4	P29074	926 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	AKT2	P31751	481 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ARL2	P36404	184 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	NAMPT	P43490	491 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ASCL1	P50553	236 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	OR1D5	P58170	312 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	LINC00205	P59089	165 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TUBA1B	P68363	451 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	EGR4	Q05215	589 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PTK6	Q13882	451 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SLMAP	Q14BN4	828 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	NHSL2	Q5HYW2	709 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TPRG1L	Q5T0D9	272 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	FAM91A1	Q658Y4	838 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	KLC3	Q6P597	504 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	OTUD6A	Q7L8S5	288 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CATSPER3	Q86XQ3	398 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PTOV1	Q86YD1	416 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ZBTB8OS	Q8IWT0	167 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	DCP1B	Q8IZD4	617 aa	Known RBP	4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ZNF441	Q8N8Z8	693 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	GPATCH11	Q8N954	259 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	LILRB4	Q8NHJ6	448 aa		4.05	□□□□□ -1.76

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