RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 IFFO1Q0D2I5 559 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 GXYLT1Q4G148 440 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 TBCELQ5QJ74 424 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 TMEM198Q66K66 360 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 GALNT18Q6P9A2 607 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 NCCRP1Q6ZVX7 275 aaPredicted RBP15.85■□□□□ 0.13
PHRF1-204ENST00000532550 TRILQ7L0X0 811 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 CCDC116Q8IYX3 515 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 OR2W6PQ8NHA6 318 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 MARVELD3Q96A59 401 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 ZNF681Q96N22 645 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 SMC6Q96SB8 1091 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 DOHHQ9BU89 302 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 GIMAP4Q9NUV9 329 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 SIRT5Q9NXA8 310 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 COQ3Q9NZJ6 369 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 HRH3Q9Y5N1 445 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 A0A1B0GVC2 190 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 ANKRD33BA6NCL7 494 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 OR14I1A6ND48 311 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 BCKDKO14874 412 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 SUSD5O60279 629 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 BCAS2O75934 225 aaPredicted RBP15.84■□□□□ 0.13
PHRF1-204ENST00000532550 UROSP10746 265 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 GPX3P22352 226 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 GRNP28799 593 aaKnown RBP15.84■□□□□ 0.13
PHRF1-204ENST00000532550 GSTM5P46439 218 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 MAN2A2P49641 1150 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 FBXW4P57775 412 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 DUSP2Q05923 314 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 C2orf80Q0P641 193 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 EXOSC7Q15024 291 aaKnown RBP15.84■□□□□ 0.13
PHRF1-204ENST00000532550 RPS6KA2Q15349 733 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 TRMT12Q53H54 448 aaKnown RBP15.84■□□□□ 0.13
PHRF1-204ENST00000532550 LIPMQ5VYY2 423 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 RIBC1Q8N443 379 aaPredicted RBP15.84■□□□□ 0.13
PHRF1-204ENST00000532550 EXOSC8Q96B26 276 aaKnown RBP15.84■□□□□ 0.13
PHRF1-204ENST00000532550 SDCCAG3Q96C92 435 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 CTHRC1Q96CG8 243 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 SECISBP2Q96T21 854 aaKnown RBP15.84■□□□□ 0.13
PHRF1-204ENST00000532550 EBPLQ9BY08 206 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 SHCBP1LQ9BZQ2 653 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 PROK2Q9HC23 129 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 RRAGDQ9NQL2 400 aaPredicted RBP15.84■□□□□ 0.13
PHRF1-204ENST00000532550 B4GALT7Q9UBV7 327 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 PRODH2Q9UF12 536 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 ZNF639Q9UID6 485 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 ACAD8Q9UKU7 415 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 CNOT11Q9UKZ1 510 aaKnown RBP15.84■□□□□ 0.13
PHRF1-204ENST00000532550 PKDREJQ9NTG1 2253 aa15.84■□□□□ 0.13
PHRF1-204ENST00000532550 FREM3P0C091 2139 aa15.83■□□□□ 0.13
PHRF1-204ENST00000532550 TRGV5A0A0B4J1U4 118 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 HCN1O60741 890 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 SNX4O95219 450 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 LRATO95237 230 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 CELA3AP09093 270 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 NUDT17P0C025 328 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 NAGAP17050 411 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 ABCD3P28288 659 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 MPIP34949 423 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 DCAF7P61962 342 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 EMC4Q5J8M3 183 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 TRIM46Q7Z4K8 759 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 PACS2Q86VP3 889 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 C10orf107Q8IVU9 208 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 PRR22Q8IZ63 422 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 OR52R1Q8NGF1 315 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 OR5M9Q8NGP3 310 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 SPPL2AQ8TCT8 520 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 CA5BP1Q8WTZ4 195 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 SARAFQ96BY9 339 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 HSPBAP1Q96EW2 488 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 C11orf24Q96F05 449 aaPredicted RBP15.83■□□□□ 0.12
PHRF1-204ENST00000532550 LCORQ96JN0 433 aaPredicted RBP15.83■□□□□ 0.12
PHRF1-204ENST00000532550 ROPN1BQ9BZX4 212 aaPredicted RBP15.83■□□□□ 0.12
PHRF1-204ENST00000532550 NXF5Q9H1B4 397 aaKnown RBP15.83■□□□□ 0.12
PHRF1-204ENST00000532550 ROPN1Q9HAT0 212 aaPredicted RBP15.83■□□□□ 0.12
PHRF1-204ENST00000532550 SLC35C2Q9NQQ7 365 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 DTX4Q9Y2E6 619 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 PLLPQ9Y342 182 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 LIPGQ9Y5X9 500 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 CACNA1CQ13936 2221 aa15.83■□□□□ 0.12
PHRF1-204ENST00000532550 TEX15Q9BXT5 2789 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 AQP7O14520 342 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 TRIM13O60858 407 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 SLU7O95391 586 aaKnown RBP15.82■□□□□ 0.12
PHRF1-204ENST00000532550 CBX7O95931 251 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 RFPL3SP0C7P2 107 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 PCSK2P16519 638 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 MRPS35P82673 323 aaKnown RBP15.82■□□□□ 0.12
PHRF1-204ENST00000532550 ZNF763Q0D2J5 394 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 LTB4RQ15722 352 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 ZNF585AQ6P3V2 769 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 EMBQ6PCB8 327 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 NUP54Q7Z3B4 507 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 SIMC1Q8NDZ2 872 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 CDC26Q8NHZ8 85 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 FAM76AQ8TAV0 307 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 ZNF675Q8TD23 568 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 RND1Q92730 232 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms